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  5. Nbi_g13021

Nbi_g13021


Description : pectin methylesterase & original description: none


Gene families : OG0000083 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000083_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g13021
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00085870 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 OrthoFinder output from all 47 species
AMTR_s00007p00264370 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
AMTR_s00007p00264470 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
AMTR_s00027p00247950 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
AMTR_s00056p00166920 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
AMTR_s00106p00092510 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.04 OrthoFinder output from all 47 species
AMTR_s00116p00025230 evm_27.TU.AmTr_v1... Probable pectinesterase 8 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT5G07420 No alias Pectin lyase-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G18990 No alias Pectin lyase-like superfamily protein 0.05 OrthoFinder output from all 47 species
AT5G19730 No alias Pectin lyase-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G26810 No alias Pectin lyase-like superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g127146 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g10289 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g12748 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g16363 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g19093 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g20368 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g37035 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g25187 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g26631 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07065 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g12101 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g04970 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07992 No alias pectin methylesterase & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g14528 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16751 No alias pectin methylesterase & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g20021 No alias pectin methylesterase & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g20106 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g20602 No alias pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g21373 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g22415 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g30459 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g56742 No alias pectin methylesterase & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g58922 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene05718.t1 Aspi01Gene05718 pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene07325.t1 Aspi01Gene07325 pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene10492.t1 Aspi01Gene10492 pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene20189.t1 Aspi01Gene20189 pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene24083.t2 Aspi01Gene24083 pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene59345.t1 Aspi01Gene59345 pectin methylesterase & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene63093.t1 Aspi01Gene63093 pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene70538.t1 Aspi01Gene70538 pectin methylesterase & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene71978.t1 Aspi01Gene71978 pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0040.g026612 No alias pectin methylesterase & original description: CDS=139-1269 0.04 OrthoFinder output from all 47 species
Azfi_s0055.g033955 No alias pectin methylesterase & original description: CDS=387-1493 0.04 OrthoFinder output from all 47 species
Azfi_s0103.g044651 No alias pectin methylesterase & original description: CDS=1-1083 0.03 OrthoFinder output from all 47 species
Azfi_s0516.g074982 No alias not classified & original description: CDS=1-498 0.05 OrthoFinder output from all 47 species
Azfi_s0648.g080905 No alias pectin methylesterase & original description: CDS=1-489 0.05 OrthoFinder output from all 47 species
Cba_g03729 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.03G008900.1 Ceric.03G008900 pectin methylesterase & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.05G031400.1 Ceric.05G031400 pectin methylesterase & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.10G069000.1 Ceric.10G069000 pectin methylesterase & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.10G071400.1 Ceric.10G071400 pectin methylesterase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.10G076400.1 Ceric.10G076400 pectin methylesterase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.11G007100.1 Ceric.11G007100 pectin methylesterase & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.11G007600.1 Ceric.11G007600 pectin methylesterase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.13G037000.1 Ceric.13G037000 pectin methylesterase & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.13G037800.1 Ceric.13G037800 pectin methylesterase & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.13G038200.1 Ceric.13G038200 pectin methylesterase & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.14G007600.1 Ceric.14G007600 pectin methylesterase & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.21G056100.1 VGDH1, Ceric.21G056100 not classified & original description: pacid=50603924... 0.04 OrthoFinder output from all 47 species
Ceric.37G019000.1 Ceric.37G019000 pectin methylesterase & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g00830 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g05020 No alias pectin methylesterase & original description: none 0.08 OrthoFinder output from all 47 species
Dac_g11068 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g11820 No alias EC_3.1 hydrolase acting on ester bond & original... 0.05 OrthoFinder output from all 47 species
Dac_g17627 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06266 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g11351 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g11729 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g16361 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g44261 No alias pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g51244 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g13696 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g27753 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g46321 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g02245 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g12393 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13571 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g15499 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g19236 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01015290001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 OrthoFinder output from all 47 species
GSVIVT01015852001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
GSVIVT01023786001 ATPE11, PE11 Cell wall.pectin.homogalacturonan.modification and... 0.04 OrthoFinder output from all 47 species
GSVIVT01031250001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
Gb_23209 No alias pectin methylesterase 0.03 OrthoFinder output from all 47 species
Gb_27225 No alias pectin methylesterase 0.03 OrthoFinder output from all 47 species
LOC_Os01g19440.1 LOC_Os01g19440 pectin methylesterase 0.04 OrthoFinder output from all 47 species
LOC_Os05g44600.1 LOC_Os05g44600 pectin methylesterase 0.03 OrthoFinder output from all 47 species
LOC_Os07g46190.1 LOC_Os07g46190 pectin methylesterase 0.03 OrthoFinder output from all 47 species
Len_g02282 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Len_g13333 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Len_g29036 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Len_g56779 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
MA_10428610g0010 No alias pectin methylesterase 0.02 OrthoFinder output from all 47 species
MA_14449g0010 No alias pectin methylesterase 0.03 OrthoFinder output from all 47 species
MA_66089g0010 No alias pectin methylesterase 0.02 OrthoFinder output from all 47 species
Mp2g01420.1 No alias pectin methylesterase 0.07 OrthoFinder output from all 47 species
Mp2g19430.1 No alias pectin methylesterase 0.02 OrthoFinder output from all 47 species
Mp3g01170.1 No alias pectin methylesterase 0.03 OrthoFinder output from all 47 species
Mp5g03920.1 No alias pectin methylesterase 0.02 OrthoFinder output from all 47 species
Mp5g03930.1 No alias pectin methylesterase 0.02 OrthoFinder output from all 47 species
Msp_g04640 No alias pectin methylesterase & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g44845 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g30255 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g06428 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g27386 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g29702 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g30829 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g31394 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g32792 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02205 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g05067 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g14779 No alias pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g24799 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g25901 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g29894 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g31507 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59766 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g63851 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010091 No alias pectin methylesterase & original description: CDS=1-882 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0064.g015880 No alias pectin methylesterase & original description: CDS=354-1487 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0104.g020122 No alias not classified & original description: CDS=269-877 0.03 OrthoFinder output from all 47 species
Sam_g02095 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Smo81583 No alias Cell wall.pectin.homogalacturonan.modification and... 0.06 OrthoFinder output from all 47 species
Solyc01g079180.4.1 Solyc01g079180 pectin methylesterase 0.03 OrthoFinder output from all 47 species
Solyc01g109740.3.1 ATPE11, PE11,... pectin methylesterase 0.04 OrthoFinder output from all 47 species
Spa_g10100 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g29457 No alias pectin methylesterase & original description: none 0.08 OrthoFinder output from all 47 species
Spa_g38344 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g40908 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g41355 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g49902 No alias pectin methylesterase & original description: none 0.08 OrthoFinder output from all 47 species
Spa_g50750 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g54581 No alias pectin methylesterase & original description: none 0.09 OrthoFinder output from all 47 species
Spa_g54582 No alias pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g01655 No alias pecTin methylesterase & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g07049 No alias pecTin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g15602 No alias pecTin methylesterase & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g19866 No alias pecTin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g36990 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g36991 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e007306_P001 Zm00001e007306 pectin methylesterase 0.03 OrthoFinder output from all 47 species
Zm00001e027944_P002 ATPE11, PE11,... pectin methylesterase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA Interproscan
BP GO:0042545 cell wall modification IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 80 366
No external refs found!