Nbi_g13143 (UPF1, ATUPF1, LBA1)

Aliases : UPF1, ATUPF1, LBA1

Description : not classified & original description: none

Gene families : OG0001598 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001598_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Nbi_g13143

Target	Alias	Description	ECC score	Gene Family Method
Ala_g33995	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ceric.14G043100.1	UPF1, ATUPF1,...	not classified & original description: pacid=50633274...	0.04	OrthoFinder output from all 47 species
Cre01.g040379	UPF1, ATUPF1, LBA1	Regulator of nonsense transcripts 1 homolog...	0.01	OrthoFinder output from all 47 species
MA_10435183g0010	UPF1, ATUPF1, LBA1	Regulator of nonsense transcripts 1 homolog...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004386	helicase activity	IEA	Interproscan
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0005975	carbohydrate metabolic process	IEP	HCCA
MF	GO:0043169	cation binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR041679	DNA2/NAM7-like_C	567	763
IPR041677	DNA2/NAM7_AAA_11	344	559

External Links

No external refs found!