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  5. Nbi_g13185

Nbi_g13185


Description : not classified & original description: none


Gene families : OG0000445 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000445_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g13185

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00079p00147910 evm_27.TU.AmTr_v1... Heavy metal-associated isoprenylated plant protein 3... 0.02 OrthoFinder output from all 47 species
AT1G29000 No alias Heavy metal transport/detoxification superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G02960 No alias Heavy metal transport/detoxification superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g075931 FP3, ATFP3 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g107557 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g54389 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G096800.1 Ceric.02G096800 not classified & original description: pacid=50585183... 0.03 OrthoFinder output from all 47 species
Dde_g48612 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g50918 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g05636 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ehy_g21662 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26515 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g24254 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g44668 FP3, ATFP3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g55269 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0075.g017391 No alias not classified & original description: CDS=1-549 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR006121 HMA_dom 20 66
IPR006121 HMA_dom 105 158
No external refs found!