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  5. Nbi_g13273

Nbi_g13273


Description : not classified & original description: none


Gene families : OG0000035 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g13273

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00270960 evm_27.TU.AmTr_v1... GDSL esterase/lipase At5g08460 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00136p00069360 evm_27.TU.AmTr_v1... GDSL esterase/lipase APG OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT2G31550 No alias SGNH hydrolase-type esterase superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G10950 No alias SGNH hydrolase-type esterase superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G41890 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.03 OrthoFinder output from all 47 species
Aob_g06473 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g12821 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene09799.t1 Aspi01Gene09799 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0094.g043446 No alias not classified & original description: CDS=32-1135 0.03 OrthoFinder output from all 47 species
Ceric.10G073800.1 Ceric.10G073800 not classified & original description: pacid=50612023... 0.04 OrthoFinder output from all 47 species
Ehy_g17012 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01018115001 GLIP7 GDSL esterase/lipase 7 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01021305001 No alias GDSL esterase/lipase At4g18970 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01036525001 GLIP7 GDSL esterase/lipase At1g29670 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os02g50690.1 LOC_Os02g50690 GDSL esterase/lipase At1g71250 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os05g44200.1 LOC_Os05g44200 GDSL esterase/lipase At5g45670 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os09g36880.1 LOC_Os09g36880 GDSL esterase/lipase EXL3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_10427890g0010 No alias GDSL esterase/lipase At2g04570 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_130877g0010 No alias GDSL esterase/lipase At2g04570 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_533908g0010 GLIP6 GDSL esterase/lipase 6 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp5g09480.1 GLIP5 GDSL esterase/lipase 4 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp7g11420.1 No alias GDSL esterase/lipase At2g42990 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Ore_g25544 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g25545 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g33633 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005150 No alias not classified & original description: CDS=1-1416 0.02 OrthoFinder output from all 47 species
Sam_g49623 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g111960.3.1 Solyc01g111960 GDSL esterase/lipase At5g55050 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc11g032050.2.1 Solyc11g032050 GDSL esterase/lipase At1g71691 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc12g049550.2.1 GLIP5, Solyc12g049550 GDSL esterase/lipase 5 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e013923_P001 Zm00001e013923 GDSL esterase/lipase At2g04570 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e019915_P001 Zm00001e019915 GDSL esterase/lipase At5g45670 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e023608_P001 Zm00001e023608 cutin synthase (CD) 0.03 OrthoFinder output from all 47 species
Zm00001e035804_P001 Zm00001e035804 GDSL esterase/lipase At2g23540 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e036748_P001 Zm00001e036748 GDSL esterase/lipase At5g37690 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016788 hydrolase activity, acting on ester bonds IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0008097 5S rRNA binding IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR001087 GDSL 45 356
No external refs found!