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  5. Nbi_g13297

Nbi_g13297


Description : EC_3.2 glycosylase & original description: none


Gene families : OG0000436 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000436_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g13297

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00131000 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.03 OrthoFinder output from all 47 species
AMTR_s01542p00001140 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.03 OrthoFinder output from all 47 species
Als_g40581 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g46287 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Als_g47838 No alias EC_3.2 glycosylase & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g35160 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g10747 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene58862.t1 Aspi01Gene58862 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g13685 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g02846 No alias EC_3.2 glycosylase & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g06336 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07578 No alias EC_3.2 glycosylase & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01012185001 No alias Enzyme classification.EC_3 hydrolases.EC_3.2... 0.02 OrthoFinder output from all 47 species
GSVIVT01037542001 No alias Enzyme classification.EC_3 hydrolases.EC_3.2... 0.03 OrthoFinder output from all 47 species
Gb_05179 No alias Enzyme classification.EC_3 hydrolases.EC_3.2... 0.03 OrthoFinder output from all 47 species
LOC_Os02g03870.1 LOC_Os02g03870 Enzyme classification.EC_3 hydrolases.EC_3.2... 0.05 OrthoFinder output from all 47 species
LOC_Os03g53790.1 LOC_Os03g53790 Enzyme classification.EC_3 hydrolases.EC_3.2... 0.02 OrthoFinder output from all 47 species
LOC_Os03g53800.3 LOC_Os03g53800 Enzyme classification.EC_3 hydrolases.EC_3.2... 0.02 OrthoFinder output from all 47 species
LOC_Os03g53860.1 LOC_Os03g53860 Enzyme classification.EC_3 hydrolases.EC_3.2... 0.02 OrthoFinder output from all 47 species
Len_g13293 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Len_g50821 No alias EC_3.2 glycosylase & original description: none 0.08 OrthoFinder output from all 47 species
Mp1g11940.1 No alias Enzyme classification.EC_3 hydrolases.EC_3.2... 0.04 OrthoFinder output from all 47 species
Mp4g13480.1 No alias Enzyme classification.EC_3 hydrolases.EC_3.2... 0.04 OrthoFinder output from all 47 species
Msp_g31982 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c4_23400V3.1 Pp3c4_23400 Glycosyl hydrolase family protein 0.02 OrthoFinder output from all 47 species
Ppi_g15177 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002581 No alias EC_3.2 glycosylase & original description: CDS=223-2043 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012087 No alias EC_3.2 glycosylase & original description: CDS=236-2119 0.04 OrthoFinder output from all 47 species
Smo157260 No alias Enzyme classification.EC_3 hydrolases.EC_3.2... 0.02 OrthoFinder output from all 47 species
Solyc06g073750.4.1 Solyc06g073750 Enzyme classification.EC_3 hydrolases.EC_3.2... 0.02 OrthoFinder output from all 47 species
Spa_g07447 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10661 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e012037_P001 Zm00001e012037 Enzyme classification.EC_3 hydrolases.EC_3.2... 0.03 OrthoFinder output from all 47 species
Zm00001e025311_P002 Zm00001e025311 Enzyme classification.EC_3 hydrolases.EC_3.2... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR001764 Glyco_hydro_3_N 54 383
IPR002772 Glyco_hydro_3_C 420 628
No external refs found!