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  5. Nbi_g13494

Nbi_g13494


Description : bHLH-type transcription factor & original description: none


Gene families : OG0000245 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000245_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g13494
Cluster HCCA: Cluster_147

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00225810 ATMYC2, MYC2,... RNA biosynthesis.transcriptional activation.bHLH... 0.04 OrthoFinder output from all 47 species
AMTR_s00021p00226670 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.02 OrthoFinder output from all 47 species
AMTR_s00099p00127980 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.05 OrthoFinder output from all 47 species
AMTR_s00121p00026620 ATMYC2, MYC2,... RNA biosynthesis.transcriptional activation.bHLH... 0.02 OrthoFinder output from all 47 species
AT1G32640 ATMYC2, MYC2,... Basic helix-loop-helix (bHLH) DNA-binding family protein 0.03 OrthoFinder output from all 47 species
AT2G46510 AIB, ATAIB ABA-inducible BHLH-type transcription factor 0.03 OrthoFinder output from all 47 species
Als_g21686 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g29175 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30820 ATMYC2, MYC2,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g35731 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g08061 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g02690 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g29698 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.04G058100.1 Ceric.04G058100 bHLH-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.24G046500.1 Ceric.24G046500 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g07876 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g14107 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16649 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g31249 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13918 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01011123001 BHLH42, TT8 RNA biosynthesis.transcriptional activation.bHLH... 0.02 OrthoFinder output from all 47 species
LOC_Os01g50940.1 AIB, ATAIB,... transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
LOC_Os07g11020.1 BHLH42, TT8,... Basic helix-loop-helix protein A OS=Pisum sativum... 0.03 OrthoFinder output from all 47 species
LOC_Os10g42430.1 ATMYC2, MYC2,... transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Lfl_g25473 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_96585g0010 BHLH42, TT8 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Msp_g19111 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g42483 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g00636 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g10858 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g42228 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g42582 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g02577 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g24853 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13609 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g29687 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007871 ATMYC2, MYC2,... bHLH-type transcription factor & original description: CDS=1-2427 0.03 OrthoFinder output from all 47 species
Solyc08g083170.1.1 Solyc08g083170 transcription factor (bHLH) 0.05 OrthoFinder output from all 47 species
Solyc10g009270.3.1 Solyc10g009270 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Solyc10g009290.1.1 Solyc10g009290 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Spa_g52382 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g28428 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e020021_P001 AIB, ATAIB,... transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 595 640
IPR025610 MYC/MYB_N 40 222
No external refs found!