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  5. Nbi_g13506

Nbi_g13506 (PIR1, MAP1, AUX1, WAV5)


Aliases : PIR1, MAP1, AUX1, WAV5

Description : auxin transporter *(AUX/LAX) & original description: none


Gene families : OG0000450 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000450_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g13506
Cluster HCCA: Cluster_174

Target Alias Description ECC score Gene Family Method Actions
Aev_g03256 PIR1, MAP1, AUX1, WAV5 auxin transporter *(AUX/LAX) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g14938 PIR1, MAP1, AUX1, WAV5 auxin transporter *(AUX/LAX) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g13220 PIR1, MAP1, AUX1, WAV5 auxin transporter *(AUX/LAX) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g38825 PIR1, MAP1, AUX1, WAV5 auxin transporter *(AUX/LAX) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g17662 PIR1, MAP1, AUX1, WAV5 auxin transporter *(AUX/LAX) & original description: none 0.03 OrthoFinder output from all 47 species
Gb_22661 LAX3 auxin transporter (AUX/LAX) 0.03 OrthoFinder output from all 47 species
LOC_Os05g37470.1 PIR1, MAP1,... auxin transporter (AUX/LAX) 0.03 OrthoFinder output from all 47 species
LOC_Os11g06820.1 LAX3, LOC_Os11g06820 auxin transporter (AUX/LAX) 0.02 OrthoFinder output from all 47 species
Lfl_g36047 PIR1, MAP1, AUX1, WAV5 auxin transporter *(AUX/LAX) & original description: none 0.03 OrthoFinder output from all 47 species
MA_10432781g0010 LAX1 auxin transporter (AUX/LAX) 0.04 OrthoFinder output from all 47 species
Pir_g14222 PIR1, MAP1, AUX1, WAV5 auxin transporter *(AUX/LAX) & original description: none 0.03 OrthoFinder output from all 47 species
Smo127494 LAX1 Solute transport.carrier-mediated transport.APC... 0.02 OrthoFinder output from all 47 species
Smo165549 LAX3 Solute transport.carrier-mediated transport.APC... 0.04 OrthoFinder output from all 47 species
Smo79053 LAX3 Solute transport.carrier-mediated transport.APC... 0.03 OrthoFinder output from all 47 species
Tin_g10150 PIR1, MAP1, AUX1, WAV5 auxin transporter *(AUX/LAX) & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013057 AA_transpt_TM 44 436
No external refs found!