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  5. Nbi_g13520

Nbi_g13520


Description : transcriptional co-regulator *(OFP) & original description: none


Gene families : OG0000209 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000209_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g13520

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00037560 OFP12, ATOFP12,... RNA biosynthesis.transcriptional activation.OFP... 0.03 OrthoFinder output from all 47 species
AMTR_s00078p00189070 OFP12, ATOFP12,... RNA biosynthesis.transcriptional activation.OFP... 0.03 OrthoFinder output from all 47 species
AT4G14860 OFP11, atofp11 ovate family protein 11 0.04 OrthoFinder output from all 47 species
AT5G04820 ATOFP13, OFP13 ovate family protein 13 0.07 OrthoFinder output from all 47 species
AT5G58360 ATOFP3, OFP3 ovate family protein 3 0.02 OrthoFinder output from all 47 species
Adi_g075269 ATOFP6, OFP6 transcriptional co-regulator *(OFP) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g04698 ATOFP5, OFP5 transcriptional co-regulator *(OFP) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g22487 ATOFP6, OFP6 transcriptional co-regulator *(OFP) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene68768.t1 ATOFP6, OFP6,... transcriptional co-regulator *(OFP) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.11G011500.1 OFP8, ATOFP8,... transcriptional co-regulator *(OFP) & original... 0.03 OrthoFinder output from all 47 species
Ceric.12G013300.1 OFP8, ATOFP8,... transcriptional co-regulator *(OFP) & original... 0.05 OrthoFinder output from all 47 species
Ceric.17G015200.1 ATOFP6, OFP6,... transcriptional co-regulator *(OFP) & original... 0.05 OrthoFinder output from all 47 species
Dac_g10583 ATOFP3, OFP3 transcriptional co-regulator *(OFP) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g12381 No alias transcriptional co-regulator *(OFP) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g03668 OFP4, ATOFP4 transcriptional co-regulator *(OFP) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01017105001 OFP14, ATOFP14 RNA biosynthesis.transcriptional activation.OFP... 0.03 OrthoFinder output from all 47 species
GSVIVT01024579001 OFP2, ATOFP2 No description available 0.04 OrthoFinder output from all 47 species
Gb_27133 OFP8, ATOFP8 transcription factor (OFP) 0.07 OrthoFinder output from all 47 species
LOC_Os02g45620.1 LOC_Os02g45620 transcription factor (OFP) 0.03 OrthoFinder output from all 47 species
LOC_Os03g06350.1 OFP11, atofp11,... transcription factor (OFP) 0.02 OrthoFinder output from all 47 species
LOC_Os04g33870.1 ATOFP13, OFP13,... transcription factor (OFP) 0.03 OrthoFinder output from all 47 species
LOC_Os04g37510.1 OFP8, ATOFP8,... transcription factor (OFP) 0.03 OrthoFinder output from all 47 species
LOC_Os10g38880.1 OFP8, ATOFP8,... transcription factor (OFP) 0.03 OrthoFinder output from all 47 species
LOC_Os11g05780.1 LOC_Os11g05780 transcription factor (OFP) 0.07 OrthoFinder output from all 47 species
LOC_Os12g06150.1 ATOFP13, OFP13,... transcription factor (OFP) 0.02 OrthoFinder output from all 47 species
Len_g14168 ATOFP3, OFP3 transcriptional co-regulator *(OFP) & original description: none 0.03 OrthoFinder output from all 47 species
Mp3g18940.1 OFP8, ATOFP8 transcription factor (OFP) 0.03 OrthoFinder output from all 47 species
Msp_g24386 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g03475 ATOFP5, OFP5 transcriptional co-regulator *(OFP) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g04957 OFP4, ATOFP4 transcriptional co-regulator *(OFP) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g45041 ATOFP6, OFP6 transcriptional co-regulator *(OFP) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g29456 No alias transcriptional co-regulator *(OFP) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g12951 OFP8, ATOFP8 transcriptional co-regulator *(OFP) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g14650 ATOFP5, OFP5 transcriptional co-regulator *(OFP) & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0099.g019558 No alias transcriptional co-regulator *(OFP) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0100.g019703 ATOFP6, OFP6 transcriptional co-regulator *(OFP) & original... 0.03 OrthoFinder output from all 47 species
Sam_g52266 No alias transcriptional co-regulator *(OFP) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc09g065350.1.1 Solyc09g065350 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc09g082080.1.1 OFP12, ATOFP12,... transcription factor (OFP) 0.02 OrthoFinder output from all 47 species
Spa_g11861 ATOFP5, OFP5 transcriptional co-regulator *(OFP) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g48011 OFP8, ATOFP8 transcriptional co-regulator *(OFP) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g32323 ATOFP5, OFP5 transcriptional co-regulator *(OFP) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e019825_P001 OFP2, ATOFP2,... transcription factor (OFP) 0.03 OrthoFinder output from all 47 species
Zm00001e024171_P001 ATOFP13, OFP13,... transcription factor (OFP) 0.03 OrthoFinder output from all 47 species
Zm00001e033910_P001 OFP14, ATOFP14,... transcription factor (OFP) 0.03 OrthoFinder output from all 47 species
Zm00001e038084_P001 OFP8, ATOFP8,... transcription factor (OFP) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR006458 Ovate_C 556 612
No external refs found!