Description : not classified & original description: none
Gene families : OG0000088 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000088_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Nbi_g13614 | |
| Cluster | HCCA: Cluster_138 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00021p00221770 | ARF1,... | RNA biosynthesis.transcriptional activation.B3... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00029p00157690 | ARF6,... | RNA biosynthesis.transcriptional activation.B3... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00044p00116500 | ARF1,... | Auxin response factor 7 OS=Oryza sativa subsp. japonica | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00211p00025860 | MP, IAA24, ARF5,... | RNA biosynthesis.transcriptional activation.B3... | 0.03 | OrthoFinder output from all 47 species | |
| AT1G19850 | MP, IAA24, ARF5 | Transcriptional factor B3 family protein /... | 0.07 | OrthoFinder output from all 47 species | |
| AT2G33860 | ARF3, ETT | Transcriptional factor B3 family protein /... | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g024483 | ARF19, IAA22, ARF11 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g075709 | ARF6 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g41559 | ARF19, IAA22, ARF11 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g12700 | ARF6 | ARF-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene38983.t1 | ARF16, Aspi01Gene38983 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0006.g010141 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: CDS=1-2961 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0038.g026103 | ARF6 | ARF-type transcription factor & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0384.g067487 | ARF8, ATARF8 | ARF-type transcription factor & original description:... | 0.07 | OrthoFinder output from all 47 species | |
| Dcu_g11626 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g30682 | ARF10 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01035204001 | ARF8, ATARF8 | RNA biosynthesis.transcriptional activation.B3... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os04g56850.1 | MP, IAA24, ARF5,... | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g12182 | ARF6 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g50454 | TIR5, MSG1,... | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0042.g012712 | ARF6 | ARF-type transcription factor & original description:... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc06g075150.3.1 | ARF16, Solyc06g075150 | transcription factor (ARF) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc07g042260.4.1 | ARF19, IAA22,... | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc08g008380.4.1 | ARF9, Solyc08g008380 | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc11g069190.2.1 | ARF4, Solyc11g069190 | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g26009 | ARF6 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e003229_P002 | ARF6, Zm00001e003229 | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e003591_P003 | ARF19, IAA22,... | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e006577_P003 | ARF8, ATARF8,... | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e012670_P001 | ARF16, Zm00001e012670 | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e013061_P001 | ARF16, Zm00001e013061 | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e018126_P002 | ARF6, Zm00001e018126 | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e041248_P001 | ARF10, Zm00001e041248 | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e041910_P003 | ARF8, ATARF8,... | transcription factor (ARF) | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005507 | copper ion binding | IEP | HCCA |
| MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |
