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  5. Nbi_g13885

Nbi_g13885


Description : not classified & original description: none


Gene families : OG0001188 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001188_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g13885

Target Alias Description ECC score Gene Family Method Actions
Adi_g024788 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g19419 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os04g57370.1 SOBER1, LOC_Os04g57370 SOBER/TIPSY effector-triggered immunity suppressor 0.02 OrthoFinder output from all 47 species
Len_g31633 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp2g23420.1 SOBER1 SOBER/TIPSY effector-triggered immunity suppressor 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0105.g020180 No alias not classified & original description: CDS=28-720 0.03 OrthoFinder output from all 47 species
Solyc12g042890.2.1 Solyc12g042890 Probable carboxylesterase Os04g0669500 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Spa_g47426 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016787 hydrolase activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005856 cytoskeleton IEP HCCA
CC GO:0005885 Arp2/3 protein complex IEP HCCA
BP GO:0007015 actin filament organization IEP HCCA
BP GO:0034314 Arp2/3 complex-mediated actin nucleation IEP HCCA
BP GO:0045010 actin nucleation IEP HCCA
BP GO:0097435 supramolecular fiber organization IEP HCCA
InterPro domains Description Start Stop
IPR003140 PLipase/COase/thioEstase 57 280
No external refs found!