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  5. Nbi_g14049

Nbi_g14049


Description : AP2-type transcription factor *(WRI/AIL) & original description: none


Gene families : OG0000110 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000110_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g14049
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00065p00077750 DRG, CKC, CKC1,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
AT2G28550 RAP2.7, TOE1 related to AP2.7 0.02 OrthoFinder output from all 47 species
AT3G20840 PLT1 Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G54320 WRI1, ATWRI1, ASML1, WRI Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G37750 DRG, CKC, CKC1, ANT Integrase-type DNA-binding superfamily protein 0.05 OrthoFinder output from all 47 species
AT5G65510 AIL7 AINTEGUMENTA-like 7 0.03 OrthoFinder output from all 47 species
Adi_g058145 AP2, FLO2, FL1 AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Aev_g10118 AP2, FLO2, FL1 AP2-type transcription factor *(WRI/AIL) & original... 0.02 OrthoFinder output from all 47 species
Aev_g39456 PLT2 AP2-type transcription factor *(WRI/AIL) & original... 0.05 OrthoFinder output from all 47 species
Ala_g26834 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.08 OrthoFinder output from all 47 species
Ala_g27522 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Als_g14196 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.09 OrthoFinder output from all 47 species
Als_g14197 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.02 OrthoFinder output from all 47 species
Als_g14935 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.04 OrthoFinder output from all 47 species
Als_g15824 AP2, FLO2, FL1 AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Als_g47612 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.06 OrthoFinder output from all 47 species
Aob_g20859 PLT2 AP2-type transcription factor *(WRI/AIL) & original... 0.04 OrthoFinder output from all 47 species
Aob_g27594 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Aop_g08912 AP2, FLO2, FL1 AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Aop_g10604 TOE3 AP2-type transcription factor *(WRI/AIL) & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene15519.t1 Aspi01Gene15519 AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene18157.t1 Aspi01Gene18157 AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene20942.t2 AP2, FLO2, FL1,... AP2-type transcription factor *(WRI/AIL) & original... 0.05 OrthoFinder output from all 47 species
Aspi01Gene38022.t1 Aspi01Gene38022 AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene60856.t1 AP2, FLO2, FL1,... AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g010452 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0059.g034553 AIL5, EMK, CHO1 AP2-type transcription factor *(WRI/AIL) & original... 0.05 OrthoFinder output from all 47 species
Azfi_s0207.g057931 WRI1, ATWRI1, ASML1, WRI AP2-type transcription factor *(WRI/AIL) & original... 0.04 OrthoFinder output from all 47 species
Cba_g06694 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.04 OrthoFinder output from all 47 species
Cba_g11379 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.05 OrthoFinder output from all 47 species
Cba_g13334 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Cba_g59950 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.05 OrthoFinder output from all 47 species
Ceric.03G029300.1 BBM, Ceric.03G029300 AP2-type transcription factor *(WRI/AIL) & original... 0.06 OrthoFinder output from all 47 species
Ceric.03G054600.1 ADAP, Ceric.03G054600 AP2-type transcription factor *(WRI/AIL) & original... 0.05 OrthoFinder output from all 47 species
Ceric.12G002600.1 Ceric.12G002600 AP2-type transcription factor *(WRI/AIL) & original... 0.1 OrthoFinder output from all 47 species
Ceric.15G054600.1 PLT2, Ceric.15G054600 AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Ceric.1Z150100.1 AP2, FLO2, FL1,... AP2-type transcription factor *(WRI/AIL) & original... 0.05 OrthoFinder output from all 47 species
Ceric.31G036600.1 Ceric.31G036600 AP2-type transcription factor *(WRI/AIL) & original... 0.08 OrthoFinder output from all 47 species
Ceric.32G008600.1 BBM, Ceric.32G008600 AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Dac_g06510 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.06 OrthoFinder output from all 47 species
Dac_g36557 AP2, FLO2, FL1 AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g08905 AP2, FLO2, FL1 AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g10360 AP2, FLO2, FL1 AP2-type transcription factor *(WRI/AIL) & original... 0.04 OrthoFinder output from all 47 species
Dcu_g10361 AP2, FLO2, FL1 AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g17762 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01016764001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 OrthoFinder output from all 47 species
Gb_05487 DRG, CKC, CKC1, ANT transcription factor (AP2) 0.03 OrthoFinder output from all 47 species
LOC_Os03g12950.1 DRG, CKC, CKC1,... no description available(sp|q84z02|crl5_orysj : 102.0) 0.04 OrthoFinder output from all 47 species
LOC_Os03g56050.1 DRG, CKC, CKC1,... transcription factor (AP2) 0.03 OrthoFinder output from all 47 species
LOC_Os06g43220.1 AP2, FLO2, FL1,... transcription factor (AP2) 0.02 OrthoFinder output from all 47 species
LOC_Os07g03250.1 DRG, CKC, CKC1,... transcription factor (AP2) 0.04 OrthoFinder output from all 47 species
Len_g20648 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.02 OrthoFinder output from all 47 species
Len_g29123 AP2, FLO2, FL1 AP2-type transcription factor *(WRI/AIL) & original... 0.05 OrthoFinder output from all 47 species
Lfl_g14576 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.05 OrthoFinder output from all 47 species
MA_10005612g0010 ADAP no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10434312g0010 TOE3 transcription factor (AP2) 0.02 OrthoFinder output from all 47 species
MA_121578g0010 DRG, CKC, CKC1, ANT transcription factor (AP2) 0.02 OrthoFinder output from all 47 species
MA_86195g0010 PLT2 transcription factor (AP2) 0.02 OrthoFinder output from all 47 species
MA_8916786g0010 PLT2 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_95471g0010 No alias transcription factor (AP2) 0.03 OrthoFinder output from all 47 species
MA_98095g0010 No alias transcription factor (AP2) 0.03 OrthoFinder output from all 47 species
Mp8g11450.1 No alias transcription factor (AP2) 0.02 OrthoFinder output from all 47 species
Msp_g32091 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.05 OrthoFinder output from all 47 species
Nbi_g09452 BBM AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Nbi_g29022 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.04 OrthoFinder output from all 47 species
Ore_g36760 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.02 OrthoFinder output from all 47 species
Pir_g37453 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Sam_g05070 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g092050.3.1 DRG, CKC, CKC1,... transcription factor (AP2) 0.06 OrthoFinder output from all 47 species
Solyc03g117720.3.1 ADAP, Solyc03g117720 transcription factor (AP2) 0.02 OrthoFinder output from all 47 species
Solyc03g123430.4.1 Solyc03g123430 transcription factor (AP2) 0.04 OrthoFinder output from all 47 species
Solyc04g077490.3.1 DRG, CKC, CKC1,... transcription factor (AP2) 0.06 OrthoFinder output from all 47 species
Solyc08g076380.3.1 WRI1, ATWRI1,... transcription factor (AP2) 0.02 OrthoFinder output from all 47 species
Spa_g11487 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.04 OrthoFinder output from all 47 species
Spa_g50963 AP2, FLO2, FL1 AP2-type transcription factor *(WRI/AIL) & original... 0.04 OrthoFinder output from all 47 species
Spa_g51078 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g10618 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.07 OrthoFinder output from all 47 species
Zm00001e004083_P002 Zm00001e004083 transcription factor (AP2) 0.03 OrthoFinder output from all 47 species
Zm00001e005817_P003 DRG, CKC, CKC1,... transcription factor (AP2) 0.02 OrthoFinder output from all 47 species
Zm00001e032754_P003 DRG, CKC, CKC1,... transcription factor (AP2) 0.03 OrthoFinder output from all 47 species
Zm00001e038652_P002 DRG, CKC, CKC1,... transcription factor (AP2) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
MF GO:0008199 ferric iron binding IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 675 726
IPR001471 AP2/ERF_dom 574 632
No external refs found!