Description : regulatory factor *(RIQ) of thylakoid grana stacking & original description: none
Gene families : OG0004779 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004779_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Nbi_g15112 | |
| Cluster | HCCA: Cluster_7 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00078p00084050 | evm_27.TU.AmTr_v1... | No description available | 0.03 | OrthoFinder output from all 47 species | |
| AT1G74730 | No alias | Protein of unknown function (DUF1118) | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g039949 | No alias | regulatory factor *(RIQ) of thylakoid grana stacking &... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g17180 | No alias | regulatory factor *(RIQ) of thylakoid grana stacking &... | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g05587 | No alias | regulatory factor *(RIQ) of thylakoid grana stacking &... | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g12282 | No alias | regulatory factor *(RIQ) of thylakoid grana stacking &... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g01953 | No alias | regulatory factor *(RIQ) of thylakoid grana stacking &... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01008063001 | No alias | No description available | 0.03 | OrthoFinder output from all 47 species | |
| Gb_16180 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os01g40310.1 | LOC_Os01g40310 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Len_g00985 | No alias | regulatory factor *(RIQ) of thylakoid grana stacking &... | 0.06 | OrthoFinder output from all 47 species | |
| Lfl_g05217 | No alias | regulatory factor *(RIQ) of thylakoid grana stacking &... | 0.02 | OrthoFinder output from all 47 species | |
| MA_10433575g0010 | No alias | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| Mp3g09060.1 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g05228 | No alias | regulatory factor *(RIQ) of thylakoid grana stacking &... | 0.06 | OrthoFinder output from all 47 species | |
| Ore_g05229 | No alias | regulatory factor *(RIQ) of thylakoid grana stacking &... | 0.05 | OrthoFinder output from all 47 species | |
| Pir_g20319 | No alias | regulatory factor *(RIQ) of thylakoid grana stacking &... | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g35554 | No alias | regulatory factor *(RIQ) of thylakoid grana stacking &... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g113240.3.1 | Solyc03g113240 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g04757 | No alias | regulatory factor *(RIQ) of thylakoid grana stacking &... | 0.07 | OrthoFinder output from all 47 species | |
| Tin_g32284 | No alias | regulatory factor *(RIQ) of thylakoid grana stacking &... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e020546_P001 | Zm00001e020546 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004518 | nuclease activity | IEP | HCCA |
| MF | GO:0004540 | ribonuclease activity | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| CC | GO:0009521 | photosystem | IEP | HCCA |
| CC | GO:0009523 | photosystem II | IEP | HCCA |
| CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | HCCA |
| BP | GO:0015979 | photosynthesis | IEP | HCCA |
| MF | GO:0016851 | magnesium chelatase activity | IEP | HCCA |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0016874 | ligase activity | IEP | HCCA |
| MF | GO:0016887 | ATP hydrolysis activity | IEP | HCCA |
| MF | GO:0019843 | rRNA binding | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| MF | GO:0051002 | ligase activity, forming nitrogen-metal bonds | IEP | HCCA |
| MF | GO:0051003 | ligase activity, forming nitrogen-metal bonds, forming coordination complexes | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
| CC | GO:1902494 | catalytic complex | IEP | HCCA |
| CC | GO:1990204 | oxidoreductase complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR009500 | DUF1118 | 151 | 264 |
| No external refs found! |
