Nbi_g15421 (CRR22)


Aliases : CRR22

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g15421
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00199190 No alias Pentatricopeptide repeat-containing protein At4g15720... 0.03 OrthoFinder output from all 47 species
AT1G18485 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G57430 OTP84 Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g008293 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g009542 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g036754 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g067176 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g07311 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g32981 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g42381 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g36540 OTP84 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g04417 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g07147 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g18758 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g18971 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g19094 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g19108 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g19312 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26581 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g59203 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g19301 OTP84 ssDNA-binding protein *(OSB) & original description: none 0.1 OrthoFinder output from all 47 species
Aob_g27256 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g30469 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g03415 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g03830 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16515 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g16533 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16535 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16842 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g18280 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g18614 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g23971 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g29941 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g33115 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g33238 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g33568 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g33599 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g61630 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g67579 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g67581 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g68694 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g70075 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0013.g013171 SLO1 not classified & original description: CDS=1-1446 0.06 OrthoFinder output from all 47 species
Azfi_s0058.g034473 No alias not classified & original description: CDS=1-2799 0.06 OrthoFinder output from all 47 species
Azfi_s0102.g044571 No alias not classified & original description: CDS=1-2829 0.06 OrthoFinder output from all 47 species
Cba_g06548 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g19801 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g19916 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.05G054800.1 Ceric.05G054800 not classified & original description: pacid=50577632... 0.04 OrthoFinder output from all 47 species
Ceric.06G036400.1 Ceric.06G036400 not classified & original description: pacid=50619976... 0.03 OrthoFinder output from all 47 species
Ceric.10G028900.1 Ceric.10G028900 not classified & original description: pacid=50613320... 0.03 OrthoFinder output from all 47 species
Ceric.11G015500.1 Ceric.11G015500 not classified & original description: pacid=50594992... 0.03 OrthoFinder output from all 47 species
Ceric.11G066400.1 Ceric.11G066400 not classified & original description: pacid=50596043... 0.03 OrthoFinder output from all 47 species
Ceric.13G039400.1 Ceric.13G039400 not classified & original description: pacid=50635903... 0.03 OrthoFinder output from all 47 species
Ceric.14G027100.1 Ceric.14G027100 not classified & original description: pacid=50633502... 0.04 OrthoFinder output from all 47 species
Ceric.14G077900.1 Ceric.14G077900 not classified & original description: pacid=50634382... 0.06 OrthoFinder output from all 47 species
Ceric.15G077000.1 EMB2261, Ceric.15G077000 not classified & original description: pacid=50639459... 0.03 OrthoFinder output from all 47 species
Ceric.17G035100.1 Ceric.17G035100 not classified & original description: pacid=50618094... 0.06 OrthoFinder output from all 47 species
Ceric.18G060200.1 Ceric.18G060200 not classified & original description: pacid=50621585... 0.04 OrthoFinder output from all 47 species
Ceric.18G079500.1 Ceric.18G079500 not classified & original description: pacid=50621579... 0.03 OrthoFinder output from all 47 species
Ceric.1Z131300.1 CRR22, Ceric.1Z131300 not classified & original description: pacid=50639026... 0.04 OrthoFinder output from all 47 species
Ceric.21G029400.1 Ceric.21G029400 not classified & original description: pacid=50602793... 0.04 OrthoFinder output from all 47 species
Ceric.21G088100.1 Ceric.21G088100 not classified & original description: pacid=50603070... 0.03 OrthoFinder output from all 47 species
Ceric.22G014800.1 Ceric.22G014800 not classified & original description: pacid=50613770... 0.05 OrthoFinder output from all 47 species
Ceric.23G019700.1 Ceric.23G019700 not classified & original description: pacid=50611424... 0.03 OrthoFinder output from all 47 species
Ceric.25G002100.1 Ceric.25G002100 not classified & original description: pacid=50593112... 0.06 OrthoFinder output from all 47 species
Ceric.25G031300.1 Ceric.25G031300 not classified & original description: pacid=50593567... 0.04 OrthoFinder output from all 47 species
Ceric.26G013500.1 Ceric.26G013500 not classified & original description: pacid=50600195... 0.04 OrthoFinder output from all 47 species
Ceric.26G020400.1 Ceric.26G020400 not classified & original description: pacid=50600093... 0.04 OrthoFinder output from all 47 species
Ceric.26G056100.1 Ceric.26G056100 not classified & original description: pacid=50599681... 0.05 OrthoFinder output from all 47 species
Ceric.26G057900.1 CRR22, Ceric.26G057900 not classified & original description: pacid=50598962... 0.03 OrthoFinder output from all 47 species
Ceric.29G055100.1 Ceric.29G055100 not classified & original description: pacid=50625141... 0.03 OrthoFinder output from all 47 species
Ceric.30G032300.1 Ceric.30G032300 not classified & original description: pacid=50608635... 0.03 OrthoFinder output from all 47 species
Ceric.36G017000.1 Ceric.36G017000 not classified & original description: pacid=50569086... 0.04 OrthoFinder output from all 47 species
Ceric.36G053200.1 CRR22, Ceric.36G053200 not classified & original description: pacid=50568627... 0.04 OrthoFinder output from all 47 species
Ceric.39G008600.1 Ceric.39G008600 not classified & original description: pacid=50582334... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021035.24 No alias Pentatricopeptide repeat-containing protein At1g63080,... 0.01 OrthoFinder output from all 47 species
Dac_g05615 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g18242 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g33215 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g35670 DOT4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g06479 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g07066 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g07693 CRR22 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dcu_g08045 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08668 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g08785 OTP84 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g08804 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g17044 EMB2758 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g17107 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g26044 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g26847 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g36116 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g37178 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g38687 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g40896 DOT4 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g45946 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g50115 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g50128 No alias ssDNA-binding protein *(OSB) & original description: none 0.09 OrthoFinder output from all 47 species
Dcu_g50137 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g08678 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g22168 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g22552 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g25754 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g26709 DOT4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g36054 VAC1, ECB2, ATECB2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g39573 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g49915 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g50757 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g29669 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01021268001 No alias Pentatricopeptide repeat-containing protein At4g18840... 0.03 OrthoFinder output from all 47 species
Gb_18600 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.04 OrthoFinder output from all 47 species
Gb_21745 CRR2 Pentatricopeptide repeat-containing protein At3g46790,... 0.04 OrthoFinder output from all 47 species
Gb_21824 CRR22 Pentatricopeptide repeat-containing protein At3g12770... 0.05 OrthoFinder output from all 47 species
Gb_22477 REME1 Pentatricopeptide repeat-containing protein At2g03880,... 0.04 OrthoFinder output from all 47 species
Gb_28902 EMB2261 Pentatricopeptide repeat-containing protein At3g49170,... 0.04 OrthoFinder output from all 47 species
Gb_31034 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Gb_33411 EMB2261 Pentatricopeptide repeat-containing protein At2g27610... 0.05 OrthoFinder output from all 47 species
Gb_38897 DOT4 Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
Len_g04685 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g07742 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18561 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g18943 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g18991 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g32413 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g35291 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g54327 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g54670 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_2991g0010 No alias RNA editing factor (MEF12) 0.02 OrthoFinder output from all 47 species
MA_475393g0010 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
Msp_g03284 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g03543 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g03928 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g14913 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g17741 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g21065 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g23157 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g23181 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g23186 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g25779 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g28498 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g28518 REME1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g32206 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g33994 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g33995 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g34436 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g41108 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g45690 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g27954 EMB2758 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g01771 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g02438 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g17591 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g37890 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g40819 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63028 EMB2261 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g63120 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g64875 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pnu_g04494 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g27693 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pp3c6_28980V3.1 Pp3c6_28980 organellar single-stranded DNA binding protein 3 0.01 OrthoFinder output from all 47 species
Ppi_g01154 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06959 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53959 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g56822 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g57858 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g19760 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g36708 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo76236 No alias Pentatricopeptide repeat-containing protein ELI1,... 0.03 OrthoFinder output from all 47 species
Solyc01g081110.4.1 SLO1, Solyc01g081110 Pentatricopeptide repeat-containing protein At1g08070,... 0.03 OrthoFinder output from all 47 species
Solyc01g097670.4.1 EMB2261, Solyc01g097670 RNA editing factor (ECD1) 0.03 OrthoFinder output from all 47 species
Solyc03g111210.4.1 Solyc03g111210 RNA editing factor (OTP80) 0.03 OrthoFinder output from all 47 species
Solyc05g013200.1.1 OTP85, Solyc05g013200 RNA editing factor (OTP85) 0.02 OrthoFinder output from all 47 species
Solyc11g008940.1.1 CRR2, Solyc11g008940 Pentatricopeptide repeat-containing protein At3g46790,... 0.03 OrthoFinder output from all 47 species
Solyc11g066920.1.1 CRR28, Solyc11g066920 Pentatricopeptide repeat-containing protein At4g21065... 0.03 OrthoFinder output from all 47 species
Spa_g02212 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g04477 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g07522 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g14555 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g18014 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g18079 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g23956 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g23969 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g24192 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g27883 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Spa_g30545 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g37535 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g45297 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g50540 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g55591 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g03506 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g04672 SLO1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g04699 EMB2261 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g05234 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g06539 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g07560 CRR22 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g09745 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17873 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g19505 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g20412 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g22906 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g22996 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26856 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g26902 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g27280 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g44074 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g44607 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g44634 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e002552_P001 Zm00001e002552 RNA editing factor (SEL1/PDM1) 0.03 OrthoFinder output from all 47 species
Zm00001e007042_P001 Zm00001e007042 RNA editing factor (AEF1) 0.02 OrthoFinder output from all 47 species
Zm00001e029819_P003 CRR22, Zm00001e029819 RNA editing factor (CRR22) 0.04 OrthoFinder output from all 47 species
Zm00001e034445_P001 LPA66, Zm00001e034445 Pentatricopeptide repeat-containing protein At5g48910... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 531 586
IPR002885 Pentatricopeptide_repeat 204 251
IPR002885 Pentatricopeptide_repeat 102 149
IPR002885 Pentatricopeptide_repeat 481 504
IPR002885 Pentatricopeptide_repeat 380 405
IPR002885 Pentatricopeptide_repeat 307 333
IPR002885 Pentatricopeptide_repeat 408 438
IPR002885 Pentatricopeptide_repeat 178 198
IPR046848 E_motif 624 686
No external refs found!