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  5. Nbi_g15701

Nbi_g15701


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g15701

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00129840 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g32430,... 0.03 OrthoFinder output from all 47 species
Adi_g035612 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g036799 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g058169 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g097993 DOT4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g15170 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g21000 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g37820 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g46412 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g49640 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36018 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g03223 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04438 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05891 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06645 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06928 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g08655 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g56508 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g63751 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g07418 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g12171 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g13913 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28594 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g39230 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g70862 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene63595.t1 EMB2261, Aspi01Gene63595 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene72317.t1 Aspi01Gene72317 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0151.g053373 No alias not classified & original description: CDS=1-2523 0.03 OrthoFinder output from all 47 species
Cba_g05866 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g29878 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.05G079500.1 Ceric.05G079500 not classified & original description: pacid=50579193... 0.03 OrthoFinder output from all 47 species
Ceric.18G000200.1 Ceric.18G000200 not classified & original description: pacid=50622455... 0.04 OrthoFinder output from all 47 species
Ceric.36G022000.1 Ceric.36G022000 not classified & original description: pacid=50568812... 0.04 OrthoFinder output from all 47 species
Dac_g05750 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07083 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08317 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g45910 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g06719 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26885 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g12413 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01037377001 OTP82 Pentatricopeptide repeat-containing protein At1g08070,... 0.03 OrthoFinder output from all 47 species
LOC_Os04g14450.1 LOC_Os04g14450 Pentatricopeptide repeat-containing protein At4g14820... 0.03 OrthoFinder output from all 47 species
Len_g04815 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g04829 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18600 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g54672 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05012 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06637 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07412 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g12140 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g16956 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g35996 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g31850 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g41053 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g41395 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g46446 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g20268 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g25474 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g25493 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g28717 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g32034 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g23510 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g23526 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g33905 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g16586 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57539 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g55202 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g50566 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo118230 CRR22 Pentatricopeptide repeat-containing protein At3g12770... 0.02 OrthoFinder output from all 47 species
Spa_g09530 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g12442 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g21770 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23504 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g29565 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g30211 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g33712 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g48112 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g53369 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 226 273
IPR002885 Pentatricopeptide_repeat 533 579
IPR002885 Pentatricopeptide_repeat 430 477
IPR002885 Pentatricopeptide_repeat 125 171
IPR002885 Pentatricopeptide_repeat 328 375
IPR002885 Pentatricopeptide_repeat 634 681
IPR002885 Pentatricopeptide_repeat 736 784
IPR046848 E_motif 854 910
IPR002885 Pentatricopeptide_repeat 811 834
No external refs found!