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  5. Nbi_g15817

Nbi_g15817


Description : not classified & original description: none


Gene families : OG0000144 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000144_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g15817
Cluster HCCA: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
Adi_g009351 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g49618 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g16584 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0064.g035696 No alias not classified & original description: CDS=1-846 0.01 OrthoFinder output from all 47 species
LOC_Os02g32840.1 LOC_Os02g32840 Zinc finger A20 and AN1 domain-containing... 0.02 OrthoFinder output from all 47 species
Len_g29468 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g39887 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g00472 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g00614 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g21543 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g22069 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g36990 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g20395 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g02339 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g29996 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
InterPro domains Description Start Stop
IPR002653 Znf_A20 162 184
IPR000058 Znf_AN1 318 353
No external refs found!