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  5. Nbi_g15831

Nbi_g15831


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g15831

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00071p00184210 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
Aev_g36953 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05568 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g06797 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g06025 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20670 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g33342 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g11806 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g18724 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g06339 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g10321 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g45756 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g47892 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g49820 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01028747001 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Len_g24341 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g36226 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g15182 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10138132g0010 No alias Pentatricopeptide repeat-containing protein At3g02330,... 0.04 OrthoFinder output from all 47 species
MA_127785g0010 REME1 Pentatricopeptide repeat-containing protein At3g24000,... 0.04 OrthoFinder output from all 47 species
Ore_g36408 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g06160 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g10389 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g26362 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g30672 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g45594 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006383 transcription by RNA polymerase III IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 124 171
IPR002885 Pentatricopeptide_repeat 22 68
IPR002885 Pentatricopeptide_repeat 328 374
IPR002885 Pentatricopeptide_repeat 225 272
IPR002885 Pentatricopeptide_repeat 402 430
IPR002885 Pentatricopeptide_repeat 98 121
No external refs found!