Nbi_g16030


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g16030

Target Alias Description ECC score Gene Family Method Actions
Adi_g005586 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005694 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g010668 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g033133 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036683 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g085311 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g109057 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g12452 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g18889 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g33318 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06136 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07262 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07426 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18939 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g19233 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g61706 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09731 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0048.g030454 No alias not classified & original description: CDS=2-2074 0.04 OrthoFinder output from all 47 species
Azfi_s0405.g068373 No alias not classified & original description: CDS=1-2967 0.04 OrthoFinder output from all 47 species
Azfi_s0474.g072983 No alias not classified & original description: CDS=1-2562 0.03 OrthoFinder output from all 47 species
Azfi_s0873.g090702 No alias not classified & original description: CDS=1-2778 0.03 OrthoFinder output from all 47 species
Cba_g04710 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05301 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05974 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19473 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.04G072400.1 Ceric.04G072400 not classified & original description: pacid=50630959... 0.03 OrthoFinder output from all 47 species
Ceric.12G018600.1 Ceric.12G018600 not classified & original description: pacid=50602205... 0.05 OrthoFinder output from all 47 species
Ceric.12G097500.1 Ceric.12G097500 not classified & original description: pacid=50601961... 0.03 OrthoFinder output from all 47 species
Ceric.20G079900.1 CRR22, Ceric.20G079900 not classified & original description: pacid=50567064... 0.03 OrthoFinder output from all 47 species
Ceric.21G029400.1 Ceric.21G029400 not classified & original description: pacid=50602793... 0.04 OrthoFinder output from all 47 species
Ceric.22G009800.1 Ceric.22G009800 not classified & original description: pacid=50615356... 0.04 OrthoFinder output from all 47 species
Ceric.28G027200.1 DOT4, Ceric.28G027200 not classified & original description: pacid=50570918... 0.03 OrthoFinder output from all 47 species
Ceric.35G003800.1 Ceric.35G003800 not classified & original description: pacid=50581275... 0.03 OrthoFinder output from all 47 species
Dde_g02801 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g02930 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g03377 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03853 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g04874 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g05920 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g05954 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g09596 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16079 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16374 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g18823 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21519 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g21994 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22169 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22667 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22999 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23069 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g24873 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g25739 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g31261 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g50292 SLO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g50757 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os11g29230.1 CRR22, LOC_Os11g29230 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
Len_g23563 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g36226 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g44793 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g59422 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_100519g0010 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.03 OrthoFinder output from all 47 species
MA_179801g0020 EMB2261 Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
Msp_g28331 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g45607 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g45693 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g46091 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g10444 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g27840 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g43649 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g07300 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g02850 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g03326 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g06896 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12185 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g12216 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12249 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12962 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13009 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g16626 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g34957 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g51106 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57161 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63623 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g32978 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g03900 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05156 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32959 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g56225 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g59303 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g61518 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0037.g011851 OTP84 not classified & original description: CDS=1-2175 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0078.g017683 No alias not classified & original description: CDS=1-2736 0.04 OrthoFinder output from all 47 species
Sam_g11238 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g16146 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g16320 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g26655 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g38969 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g50566 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g02212 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g06160 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g08133 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g13906 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g18079 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g18959 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g21662 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g23612 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23956 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g26362 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g26703 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g30214 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g32588 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g33276 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g47991 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g50886 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g53497 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g55591 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g05579 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g24828 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g35271 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e003605_P001 DOT4, Zm00001e003605 Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
Zm00001e011467_P004 emb1899, EMB175,... Pentatricopeptide repeat-containing protein At5g03800... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 93 140
IPR002885 Pentatricopeptide_repeat 298 344
IPR002885 Pentatricopeptide_repeat 399 446
IPR002885 Pentatricopeptide_repeat 503 549
IPR002885 Pentatricopeptide_repeat 196 242
IPR002885 Pentatricopeptide_repeat 476 501
IPR002885 Pentatricopeptide_repeat 272 295
No external refs found!