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  5. Nbi_g16495

Nbi_g16495


Description : not classified & original description: none


Gene families : OG0000181 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000181_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g16495

Target Alias Description ECC score Gene Family Method Actions
Als_g55308 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g68234 No alias GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g69527 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene24615.t1 ATGRAS2, SCL14,... GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene24624.t1 ATGRAS2, SCL14,... GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g12919 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g19652 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g33030 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g35155 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g43090 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g17618 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g21508 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g21005 No alias GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06907 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g15428 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g15664 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g46633 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g62859 No alias GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0026.g009546 No alias GRAS-type transcription factor & original description: CDS=1-2640 0.03 OrthoFinder output from all 47 species
Spa_g17280 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g19021 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g26523 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g51476 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR005202 TF_GRAS 304 396
No external refs found!