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  5. Nbi_g17134

Nbi_g17134


Description : not classified & original description: none


Gene families : OG0000434 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000434_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g17134
Cluster HCCA: Cluster_140

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00249400 evm_27.TU.AmTr_v1... Protein MOTHER of FT and TFL1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00066p00045830 FT,... Protein HEADING DATE 3A OS=Oryza sativa subsp. japonica 0.03 OrthoFinder output from all 47 species
AT1G65480 FT PEBP (phosphatidylethanolamine-binding protein) family protein 0.04 OrthoFinder output from all 47 species
AT2G27550 ATC centroradialis 0.03 OrthoFinder output from all 47 species
Aev_g39970 TFL-1, TFL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g23474 TFL-1, TFL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g25350 No alias not classified & original description: none 0.17 OrthoFinder output from all 47 species
Aop_g28947 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Aop_g31721 No alias not classified & original description: none 0.14 OrthoFinder output from all 47 species
Aop_g69306 No alias not classified & original description: none 0.13 OrthoFinder output from all 47 species
Aop_g69369 FT not classified & original description: none 0.12 OrthoFinder output from all 47 species
Aop_g69370 FT not classified & original description: none 0.15 OrthoFinder output from all 47 species
Azfi_s0032.g024801 No alias not classified & original description: CDS=1-471 0.06 OrthoFinder output from all 47 species
Ceric.06G045500.1 Ceric.06G045500 not classified & original description: pacid=50620154... 0.1 OrthoFinder output from all 47 species
Ceric.22G072400.1 Ceric.22G072400 not classified & original description: pacid=50615120... 0.05 OrthoFinder output from all 47 species
Ceric.22G072500.1 Ceric.22G072500 not classified & original description: pacid=50613817... 0.09 OrthoFinder output from all 47 species
Ceric.22G072600.1 Ceric.22G072600 not classified & original description: pacid=50614502... 0.08 OrthoFinder output from all 47 species
Ceric.34G007800.1 Ceric.34G007800 not classified & original description: pacid=50623830... 0.06 OrthoFinder output from all 47 species
Ceric.34G008300.1 E12A11, MFT,... not classified & original description: pacid=50624028... 0.04 OrthoFinder output from all 47 species
Dac_g14590 TFL-1, TFL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g12975 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g50354 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g30835 No alias not classified & original description: none 0.2 OrthoFinder output from all 47 species
Ehy_g00405 E12A11, MFT not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g16034 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g30837 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01003663001 E12A11, MFT Protein MOTHER of FT and TFL1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01008404001 E12A11, MFT Protein MOTHER of FT and TFL1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01033829001 TFL-1, TFL1 Protein TERMINAL FLOWER 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01036145001 ATC CEN-like protein 2 OS=Nicotiana tabacum 0.04 OrthoFinder output from all 47 species
Gb_17506 FT PEB protein-dependent signalling regulatory protein (PEBP) 0.03 OrthoFinder output from all 47 species
LOC_Os06g06300.1 FT, LOC_Os06g06300 PEB protein-dependent signalling regulatory protein (PEBP) 0.03 OrthoFinder output from all 47 species
Len_g53659 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Len_g57184 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g57185 E12A11, MFT not classified & original description: none 0.11 OrthoFinder output from all 47 species
Len_g57186 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g57325 TFL-1, TFL1 not classified & original description: none 0.11 OrthoFinder output from all 47 species
MA_147441g0010 ATC PEB protein-dependent signalling regulatory protein (PEBP) 0.02 OrthoFinder output from all 47 species
MA_400747g0010 FT PEB protein-dependent signalling regulatory protein (PEBP) 0.01 OrthoFinder output from all 47 species
Mp2g12650.1 E12A11, MFT PEB protein-dependent signalling regulatory protein (PEBP) 0.02 OrthoFinder output from all 47 species
Msp_g40470 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Msp_g40916 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g44454 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g44484 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Msp_g44485 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Msp_g47036 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Ore_g27359 E12A11, MFT not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g00291 E12A11, MFT not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g04982 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g27748 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g33595 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g119100.2.1 E12A11, MFT,... PEB protein-dependent signalling regulatory protein (PEBP) 0.05 OrthoFinder output from all 47 species
Solyc09g009560.2.1 TFL-1, TFL1,... PEB protein-dependent signalling regulatory protein (PEBP) 0.02 OrthoFinder output from all 47 species
Tin_g35798 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g40601 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g44572 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g45908 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e008880_P001 TSF, Zm00001e008880 PEB protein-dependent signalling regulatory protein (PEBP) 0.03 OrthoFinder output from all 47 species
Zm00001e025657_P001 E12A11, MFT,... PEB protein-dependent signalling regulatory protein (PEBP) 0.02 OrthoFinder output from all 47 species
Zm00001e026057_P001 FT, Zm00001e026057 PEB protein-dependent signalling regulatory protein (PEBP) 0.03 OrthoFinder output from all 47 species
Zm00001e027418_P001 FT, Zm00001e027418 PEB protein-dependent signalling regulatory protein (PEBP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR008914 PEBP 81 198
No external refs found!