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  5. Nbi_g17819

Nbi_g17819 (PTAC17)


Aliases : PTAC17

Description : cofactor of plastid-encoded RNA polymerase *(TAC17) & original description: none


Gene families : OG0001348 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001348_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Nbi_g17819

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00033p00183310 PTAC17,... RNA biosynthesis.organelle machineries.RNA polymerase... 0.02 OrthoFinder output from all 47 species
Adi_g011336 PTAC17 cofactor of plastid-encoded RNA polymerase *(TAC17) &... 0.02 OrthoFinder output from all 47 species
Adi_g057640 No alias cofactor of plastid-encoded RNA polymerase *(TAC17) &... 0.02 OrthoFinder output from all 47 species
Ala_g23339 PTAC17 cofactor of plastid-encoded RNA polymerase *(TAC17) &... 0.01 OrthoFinder output from all 47 species
Dac_g22058 PTAC17 cofactor of plastid-encoded RNA polymerase *(TAC17) &... 0.02 OrthoFinder output from all 47 species
Gb_13256 PTAC17 TAC17 cofactor of plastid-encoded RNA polymerase 0.01 OrthoFinder output from all 47 species
Ore_g26422 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g12054 PTAC17 cofactor of plastid-encoded RNA polymerase *(TAC17) &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0057.g014804 PTAC17 cofactor of plastid-encoded RNA polymerase *(TAC17) &... 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0495.g027428 PTAC17 cofactor of plastid-encoded RNA polymerase *(TAC17) &... 0.01 OrthoFinder output from all 47 species
Solyc03g117430.3.1 PTAC17, Solyc03g117430 TAC17 cofactor of plastid-encoded RNA polymerase 0.03 OrthoFinder output from all 47 species
Spa_g56718 PTAC17 cofactor of plastid-encoded RNA polymerase *(TAC17) &... 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
InterPro domains Description Start Stop
IPR011629 CobW-like_C 417 510
IPR003495 CobW/HypB/UreG_dom 146 331
No external refs found!