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  5. Nbi_g18752

Nbi_g18752 (TIFY2B, ZML1, GATA24)


Aliases : TIFY2B, ZML1, GATA24

Description : transcription factor *(C-GATA) & original description: none


Gene families : OG0001741 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001741_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g18752

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00033p00221090 ZML2, GATA28,... RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
Aev_g07670 TIFY2B, ZML1, GATA24 transcription factor *(C-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g009618 TIFY2B, ZML1, GATA24 transcription factor *(C-GATA) & original description:... 0.03 OrthoFinder output from all 47 species
Cba_g17346 ZML2, GATA28, TIFY2A transcription factor *(C-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01009198001 TIFY2B, ZML1, GATA24 RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder output from all 47 species
Solyc01g106030.4.1 TIFY2B, ZML1,... transcription factor (GATA) 0.03 OrthoFinder output from all 47 species
Solyc10g047640.3.1 TIFY2B, ZML1,... transcription factor (GATA) 0.03 OrthoFinder output from all 47 species
Zm00001e013157_P003 TIFY2B, ZML1,... transcription factor (GATA) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0032182 ubiquitin-like protein binding IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0043130 ubiquitin binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR010399 Tify_dom 125 157
IPR000679 Znf_GATA 267 301
IPR010402 CCT_domain 191 233
No external refs found!