Nbi_g18808 (SAMT1, SAMC1)


Aliases : SAMT1, SAMC1

Description : solute transporter *(MTCC) & original description: none


Gene families : OG0003529 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003529_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g18808

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001000.21 SAMT1, SAMC1 Solute transport.carrier-mediated transport.MC-type... 0.03 OrthoFinder output from all 47 species
Dac_g01512 SAMT1, SAMC1 solute transporter *(MTCC) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01022254001 SAMT1, SAMC1 Solute transport.carrier-mediated transport.MC-type... 0.03 OrthoFinder output from all 47 species
LOC_Os07g19460.1 SAMT1, SAMC1,... solute transporter (MTCC) 0.02 OrthoFinder output from all 47 species
Mp8g05870.1 SAMT1, SAMC1 solute transporter (MTCC) 0.02 OrthoFinder output from all 47 species
Smo146160 SAMT1, SAMC1 Solute transport.carrier-mediated transport.MC-type... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR018108 Mitochondrial_sb/sol_carrier 91 161
IPR018108 Mitochondrial_sb/sol_carrier 264 347
IPR018108 Mitochondrial_sb/sol_carrier 168 249
No external refs found!