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  5. Nbi_g18960

Nbi_g18960


Description : not classified & original description: none


Gene families : OG0003467 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003467_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g18960
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00213680 evm_27.TU.AmTr_v1... Reticulon-like protein B18 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AMTR_s00065p00202980 evm_27.TU.AmTr_v1... Reticulon-like protein B21 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT2G20590 No alias Reticulon family protein 0.05 OrthoFinder output from all 47 species
Aev_g22301 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g15679 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g59860 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g11427 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene46636.t1 Aspi01Gene46636 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.35G033400.1 Ceric.35G033400 not classified & original description: pacid=50581205... 0.03 OrthoFinder output from all 47 species
Dac_g01665 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g02951 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g06377 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g30457 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
GSVIVT01020595001 No alias Reticulon-like protein B17 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Gb_25024 No alias Reticulon-like protein B21 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os08g17870.1 LOC_Os08g17870 Reticulon-like protein B21 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_18411g0010 No alias Reticulon-like protein B21 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_22853g0010 No alias Reticulon-like protein B21 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Mp1g14200.1 No alias Reticulon-like protein B21 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Msp_g08988 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g34406 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Smo405772 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 OrthoFinder output from all 47 species
Solyc07g005470.4.1 Solyc07g005470 Reticulon-like protein B21 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc07g053700.4.1 Solyc07g053700 Reticulon-like protein B17 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g09370 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g09371 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g51972 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g30838 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e024730_P001 Zm00001e024730 Reticulon-like protein B17 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
InterPro domains Description Start Stop
IPR003388 Reticulon 393 545
No external refs found!