Nbi_g19139 (ATRZ-1A)

Aliases : ATRZ-1A

Description : RNA chaperone *(RZ1) & original description: none

Gene families : OG0000073 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000073_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Nbi_g19139

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00012p00258090	evm_27.TU.AmTr_v1...	Glycine-rich RNA-binding protein 4, mitochondrial...	0.03	OrthoFinder output from all 47 species
Adi_g021389	GR-RBP3	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g04232	GRP2, ATGRP2, GR-RBP2	RNA editing factor *(ORRM3) & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g57632	CCR2, ATGRP7,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g09618	No alias	RNA editing factor *(ORRM3) & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003723	RNA binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	10	78
IPR001878	Znf_CCHC	105	121

External Links

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