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  5. Nbi_g19604

Nbi_g19604


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g19604
Cluster HCCA: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00252350 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g22690... 0.02 OrthoFinder output from all 47 species
Adi_g004512 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g005243 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g034868 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g035357 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g035621 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g036683 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g036739 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g42949 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g16565 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g17191 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g33318 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36105 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g36200 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g36543 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g54869 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03193 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g33112 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0015.g013978 CRR22 not classified & original description: CDS=1-2136 0.02 OrthoFinder output from all 47 species
Azfi_s0035.g025464 No alias not classified & original description: CDS=1-2154 0.04 OrthoFinder output from all 47 species
Azfi_s0171.g055669 No alias not classified & original description: CDS=1-2286 0.03 OrthoFinder output from all 47 species
Azfi_s0233.g059378 No alias not classified & original description: CDS=1-1827 0.03 OrthoFinder output from all 47 species
Cba_g04064 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05301 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05714 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05763 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19473 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34897 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.32G071400.1 CRR22, Ceric.32G071400 not classified & original description: pacid=50598182... 0.03 OrthoFinder output from all 47 species
Dac_g05682 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g27446 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g32529 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g36017 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g11021 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g15725 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01009977001 No alias Pentatricopeptide repeat-containing protein At1g43980,... 0.02 OrthoFinder output from all 47 species
Len_g09279 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g17360 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g17928 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g22113 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g26281 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g17061 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_3462g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Msp_g34466 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g40961 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07857 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g18773 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02309 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12988 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13001 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g31112 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g42576 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g47300 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g51366 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57079 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57161 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63187 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63498 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63505 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g64554 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g30441 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g46005 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53944 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g56225 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59328 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g13748 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g16320 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g26655 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g29293 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g38969 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g06411 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g13768 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g18079 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23949 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g30211 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g06491 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06624 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17618 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g23271 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26897 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g29863 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g44203 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 492 540
IPR002885 Pentatricopeptide_repeat 593 642
IPR002885 Pentatricopeptide_repeat 796 843
IPR002885 Pentatricopeptide_repeat 391 438
IPR002885 Pentatricopeptide_repeat 293 341
IPR002885 Pentatricopeptide_repeat 695 742
IPR002885 Pentatricopeptide_repeat 193 239
IPR002885 Pentatricopeptide_repeat 669 690
IPR002885 Pentatricopeptide_repeat 770 794
No external refs found!