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  5. Nbi_g20177

Nbi_g20177


Description : not classified & original description: none


Gene families : OG0000063 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000063_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g20177

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00160510 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT1G09740 No alias Adenine nucleotide alpha hydrolases-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G25930 No alias Adenine nucleotide alpha hydrolases-like superfamily protein 0.04 OrthoFinder output from all 47 species
Aev_g23564 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g00422 PHOS32, ATPHOS32 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g08630 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g44724 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g54544 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13498 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g37343 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene15372.t1 Aspi01Gene15372 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene28484.t1 Aspi01Gene28484 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene28485.t1 Aspi01Gene28485 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene29654.t1 Aspi01Gene29654 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene37518.t1 Aspi01Gene37518 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene37519.t1 Aspi01Gene37519 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene55688.t1 Aspi01Gene55688 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene59960.t1 Aspi01Gene59960 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene62788.t1 Aspi01Gene62788 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0303.g063793 No alias not classified & original description: CDS=117-590 0.03 OrthoFinder output from all 47 species
Azfi_s0489.g073515 No alias not classified & original description: CDS=471-992 0.03 OrthoFinder output from all 47 species
Ceric.07G000800.1 Ceric.07G000800 not classified & original description: pacid=50627155... 0.02 OrthoFinder output from all 47 species
Ceric.14G013200.1 Ceric.14G013200 not classified & original description: pacid=50633294... 0.03 OrthoFinder output from all 47 species
Ceric.21G005300.1 Ceric.21G005300 not classified & original description: pacid=50604253... 0.04 OrthoFinder output from all 47 species
Ceric.28G005900.1 Ceric.28G005900 not classified & original description: pacid=50570573... 0.04 OrthoFinder output from all 47 species
Dac_g04538 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g20809 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g26303 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g29720 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g20927 RD2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g23687 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g45675 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g00336 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dde_g05680 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g30878 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g00283 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g10171 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01028109001 No alias No description available 0.05 OrthoFinder output from all 47 species
Gb_20328 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_20331 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_28753 RD2 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_37413 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os02g47650.1 RD2, LOC_Os02g47650 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os05g37970.1 LOC_Os05g37970 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g19281 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g48312 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g48313 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g54918 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g02578 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g17856 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g27197 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g28997 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10435390g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10437265g0020 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_139433g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_18127g0010 RD2 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_61335g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_720108g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp1g05760.1 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Nbi_g37342 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g29239 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g43664 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g04955 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g11516 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g25803 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g56166 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g02623 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g02626 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59165 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g64165 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g07744 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g15631 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo79236 No alias Universal stress protein PHOS34 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc01g109710.3.1 RD2, Solyc01g109710 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Solyc06g009050.3.1 Solyc06g009050 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc06g084540.3.1 Solyc06g084540 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g00638 ATPHOS34, PHOS34 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g14630 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g38853 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g02317 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g04358 RD2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g09948 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006016 UspA 66 219
No external refs found!