Nbi_g20334 (OTP84)


Aliases : OTP84

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g20334

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00166520 evm_27.TU.AmTr_v1... RNA processing.organelle machineries.RNA... 0.02 OrthoFinder output from all 47 species
AT3G25970 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
Aev_g18317 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g42174 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g17536 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07390 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g26563 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g54594 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g40241 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g27583 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.03G014400.1 Ceric.03G014400 not classified & original description: pacid=50572365... 0.05 OrthoFinder output from all 47 species
Dac_g25286 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g25598 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g19160 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os01g72049.1 PTAC9, OSB2,... ssDNA-binding protein (OSB). TAC9 cofactor of... 0.02 OrthoFinder output from all 47 species
Len_g17561 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18456 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g06204 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_39595g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Mp8g01790.1 No alias ssDNA-binding protein (OSB) 0.02 OrthoFinder output from all 47 species
Ore_g35307 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g05307 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06944 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29289 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g30938 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g32977 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g45354 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59290 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0021.g008505 CRR22 not classified & original description: CDS=1-1692 0.04 OrthoFinder output from all 47 species
Smo11063 REME1 Pentatricopeptide repeat-containing protein At2g34400... 0.04 OrthoFinder output from all 47 species
Smo173139 VAC1, ECB2, ATECB2 Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
Spa_g40438 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g03506 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g04699 EMB2261 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g05234 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g06129 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g06522 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Tin_g16979 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g44634 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 181 205
IPR002885 Pentatricopeptide_repeat 483 508
IPR002885 Pentatricopeptide_repeat 4 51
IPR002885 Pentatricopeptide_repeat 104 151
IPR002885 Pentatricopeptide_repeat 307 354
IPR002885 Pentatricopeptide_repeat 408 454
IPR002885 Pentatricopeptide_repeat 206 252
IPR002885 Pentatricopeptide_repeat 382 404
No external refs found!