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  5. Nbi_g20480

Nbi_g20480


Description : not classified & original description: none


Gene families : OG0000144 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000144_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g20480
Cluster HCCA: Cluster_153

Target Alias Description ECC score Gene Family Method Actions
Adi_g012490 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g22674 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s1159.g098529 No alias not classified & original description: CDS=1-846 0.01 OrthoFinder output from all 47 species
Cba_g07448 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os06g41010.1 LOC_Os06g41010 Zinc finger A20 and AN1 domain-containing... 0.05 OrthoFinder output from all 47 species
Lfl_g21218 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g21543 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g22069 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp4g23510.1 No alias Zinc finger A20 and AN1 domain-containing... 0.02 OrthoFinder output from all 47 species
Ore_g04090 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g07594 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g37939 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g46407 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g02686 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g11889 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g02780 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13125 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0045.g013142 No alias not classified & original description: CDS=1-786 0.02 OrthoFinder output from all 47 species
Solyc01g086970.4.1 Solyc01g086970 Zinc finger A20 and AN1 domain-containing... 0.03 OrthoFinder output from all 47 species
Solyc12g100060.1.1 Solyc12g100060 Zinc finger A20 and AN1 domain-containing... 0.03 OrthoFinder output from all 47 species
Spa_g02339 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g29996 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e014082_P001 Zm00001e014082 Zinc finger A20 and AN1 domain-containing... 0.02 OrthoFinder output from all 47 species
Zm00001e025028_P001 Zm00001e025028 Zinc finger A20 and AN1 domain-containing... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR000058 Znf_AN1 130 167
IPR002653 Znf_A20 36 59
No external refs found!