Nbi_g20890

Description : component *(uL29) of large ribosomal-subunit (LSU) proteome & original description: none

Gene families : OG0000495 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000495_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Nbi_g20890
Cluster	HCCA: Cluster_66

Target	Alias	Description	ECC score	Gene Family Method
Adi_g042798	No alias	component *(uL29) of large ribosomal-subunit (LSU)...	0.01	OrthoFinder output from all 47 species
Adi_g124923	No alias	component *(uL29) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Als_g56144	No alias	component *(uL29) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 47 species
Als_g64013	No alias	component *(uL29) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Aob_g10353	No alias	component *(uL29) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Aob_g38229	No alias	component *(uL29) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Aob_g39138	No alias	component *(uL29) of large ribosomal-subunit (LSU)...	0.07	OrthoFinder output from all 47 species
Aop_g16039	No alias	component *(uL29) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 47 species
Aop_g19909	No alias	component *(uL29) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Aop_g24019	No alias	component *(uL29) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Aop_g52553	No alias	component *(uL29) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Aspi01Gene51179.t1	Aspi01Gene51179	component *(uL29) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Cba_g54857	No alias	component *(uL29) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Dac_g29193	No alias	component *(uL29) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Dcu_g28468	No alias	component *(uL29) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Dcu_g44954	No alias	component *(uL29) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Lfl_g24559	No alias	component *(uL29) of large ribosomal-subunit (LSU)...	0.01	OrthoFinder output from all 47 species
Nbi_g42137	No alias	component *(uL29) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Pir_g03536	No alias	component *(uL29) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Pir_g62476	No alias	component *(uL29) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Ppi_g22608	No alias	component *(uL29) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Ppi_g37803	No alias	component *(uL29) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Sam_g06030	No alias	component *(uL29) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Sam_g30978	No alias	component *(uL29) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Sam_g31723	No alias	component *(uL29) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Sam_g36756	No alias	component *(uL29) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Spa_g34294	No alias	component *(uL29) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Tin_g33980	No alias	component *(uL29) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Tin_g35865	No alias	component *(uL29) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Tin_g39900	No alias	component *(uL29) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001854	Ribosomal_L29/L35	8	63

External Links

No external refs found!

Nbi_g20890

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation