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Nbi_g21076 (AGO1)


Aliases : AGO1

Description : miRNA recruiting factor (AGO) of RNA-induced silencing complex (RISC) assembly & original description: none


Gene families : OG0000157 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000157_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Nbi_g21076

Target Alias Description ECC score Gene Family Method Actions
Aev_g46532 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g11793 AGO1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01012490001 AGO7, ZIP Protein argonaute 7 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Len_g11453 AGO4, OCP11 siRNA-integrating factor *(AGO) & original description: none 0.05 OrthoFinder output from all 47 species
Mp1g18110.1 AGO1 RIS-Complex miRNA recruiting factor (AGO1) 0.02 OrthoFinder output from all 47 species
Ore_g41760 PNH, AGO10, ZLL not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc09g082830.4.1 PNH, AGO10, ZLL,... RIS-Complex miRNA recruiting factor (AGO1) 0.02 OrthoFinder output from all 47 species
Tin_g08802 AGO1 regulatory protein *(AGO7) of transacTing siRNA pathway... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
InterPro domains Description Start Stop
IPR032474 Argonaute_N 358 492
IPR014811 ArgoL1 502 552
IPR032472 ArgoL2 693 739
IPR032473 Argonaute_Mid_dom 750 826
IPR003165 Piwi 842 1161
IPR003100 PAZ_dom 559 683
No external refs found!