Nbi_g21980 (IXR1, CEV1, CESA3,...)

Aliases : IXR1, CEV1, CESA3, ATCESA3, ATH-B

Description : catalytic component *(CesA) of cellulose synthase complex & original description: none

Gene families : OG0000089 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000089_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Nbi_g21980

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00022p00086120	ATH-A, CESA2,...	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.03	OrthoFinder output from all 47 species
AMTR_s00081p00171100	AtCESA1, RSW1,...	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.04	OrthoFinder output from all 47 species
AMTR_s00103p00124340	IXR1, CEV1,...	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.04	OrthoFinder output from all 47 species
AT2G32620	ATCSLB02, ATCSLB2, CSLB02	cellulose synthase-like B	0.02	OrthoFinder output from all 47 species
AT4G15290	ATCSLB05, CSLB05, ATCSLB5	Cellulose synthase family protein	0.04	OrthoFinder output from all 47 species
AT4G18780	CESA8, LEW2,...	cellulose synthase family protein	0.03	OrthoFinder output from all 47 species
AT5G17420	MUR10, ATCESA7,...	Cellulose synthase family protein	0.03	OrthoFinder output from all 47 species
AT5G44030	CESA4, NWS2, IRX5	cellulose synthase A4	0.03	OrthoFinder output from all 47 species
AT5G64740	CESA6, PRC1, IXR2, E112	cellulose synthase 6	0.03	OrthoFinder output from all 47 species
Adi_g014232	ATH-A, CESA2, ATCESA2	catalytic component *(CesA) of cellulose synthase...	0.04	OrthoFinder output from all 47 species
Adi_g057685	MUR10, ATCESA7,...	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Adi_g067335	AtCESA1, RSW1, CESA1	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Adi_g082474	ATH-A, CESA2, ATCESA2	catalytic component *(CesA) of cellulose synthase...	0.02	OrthoFinder output from all 47 species
Adi_g082875	CESA5	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g112515	ATH-A, CESA2, ATCESA2	catalytic component *(CesA) of cellulose synthase...	0.04	OrthoFinder output from all 47 species
Aev_g29681	AtCESA1, RSW1, CESA1	catalytic component *(CesA) of cellulose synthase...	0.02	OrthoFinder output from all 47 species
Als_g30902	ATH-A, CESA2, ATCESA2	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Als_g47693	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.04	OrthoFinder output from all 47 species
Aob_g06077	AtCESA1, RSW1, CESA1	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Aop_g68533	ATCSLD2, CSLD2	mannan synthase *(CSLD) & original description: none	0.04	OrthoFinder output from all 47 species
Azfi_s0095.g043662	AtCESA1, RSW1, CESA1	catalytic component *(CesA) of cellulose synthase...	0.04	OrthoFinder output from all 47 species
Azfi_s1123.g097771	ATCSLD2, CSLD2	mannan synthase *(CSLD) & original description: CDS=1-3714	0.04	OrthoFinder output from all 47 species
Cba_g07717	ATH-A, CESA2, ATCESA2	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Cba_g76047	ATH-A, CESA2, ATCESA2	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Ceric.09G024100.1	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Ceric.30G072100.1	ATCSLD3, KJK,...	mannan synthase *(CSLD) & original description:...	0.04	OrthoFinder output from all 47 species
Dac_g01048	ATCSLD3, KJK, CSLD3	mannan synthase *(CSLD) & original description: none	0.04	OrthoFinder output from all 47 species
Dac_g10159	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.05	OrthoFinder output from all 47 species
Dac_g20850	ATH-A, CESA2, ATCESA2	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Dac_g30499	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Dac_g34792	ATH-A, CESA2, ATCESA2	catalytic component *(CesA) of cellulose synthase...	0.04	OrthoFinder output from all 47 species
Dcu_g09052	ATH-A, CESA2, ATCESA2	catalytic component *(CesA) of cellulose synthase...	0.04	OrthoFinder output from all 47 species
Dcu_g12277	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.04	OrthoFinder output from all 47 species
Dde_g47289	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.04	OrthoFinder output from all 47 species
Ehy_g06173	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Ehy_g06186	CESA09, CESA9	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Ehy_g23161	AtCESA1, RSW1, CESA1	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
GSVIVT01013471001	ATH-A, CESA2, ATCESA2	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.05	OrthoFinder output from all 47 species
LOC_Os02g49332.1	ATCSLE1, CSLE1,...	Cellulose synthase-like protein E2 OS=Oryza sativa...	0.02	OrthoFinder output from all 47 species
LOC_Os03g59340.1	IXR1, CEV1,...	catalytic component CesA of cellulose synthase complex	0.03	OrthoFinder output from all 47 species
LOC_Os05g08370.1	AtCESA1, RSW1,...	catalytic component CesA of cellulose synthase complex	0.04	OrthoFinder output from all 47 species
LOC_Os07g10770.1	IXR1, CEV1,...	catalytic component CesA of cellulose synthase complex	0.04	OrthoFinder output from all 47 species
LOC_Os07g14850.1	ATH-A, CESA2,...	catalytic component CesA of cellulose synthase complex	0.04	OrthoFinder output from all 47 species
LOC_Os07g36750.1	ATCSLD2, CSLD2,...	D-glucan synthase (CSLF)	0.02	OrthoFinder output from all 47 species
LOC_Os10g42750.1	ATCSLD3, KJK,...	mannan synthase (CSLD)	0.02	OrthoFinder output from all 47 species
Len_g21666	ATCSLD3, KJK, CSLD3	mannan synthase *(CSLD) & original description: none	0.05	OrthoFinder output from all 47 species
Lfl_g34874	ATCSLD3, KJK, CSLD3	mannan synthase *(CSLD) & original description: none	0.04	OrthoFinder output from all 47 species
Mp2g07690.1	ATH-A, CESA2, ATCESA2	catalytic component CesA of cellulose synthase complex	0.02	OrthoFinder output from all 47 species
Mp7g07800.1	AtCESA1, RSW1, CESA1	catalytic component CesA of cellulose synthase complex	0.02	OrthoFinder output from all 47 species
Ore_g06388	ATH-A, CESA2, ATCESA2	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Ore_g12166	ATH-A, CESA2, ATCESA2	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g01693	AtCESA1, RSW1, CESA1	catalytic component *(CesA) of cellulose synthase...	0.05	OrthoFinder output from all 47 species
Pir_g02585	ATH-A, CESA2, ATCESA2	catalytic component *(CesA) of cellulose synthase...	0.04	OrthoFinder output from all 47 species
Pir_g18323	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Pir_g19942	ATH-A, CESA2, ATCESA2	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Ppi_g22229	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.06	OrthoFinder output from all 47 species
Ppi_g30689	AtCESA1, RSW1, CESA1	catalytic component *(CesA) of cellulose synthase...	0.04	OrthoFinder output from all 47 species
Sam_g16309	No alias	catalytic component *(CesA) of cellulose synthase...	0.02	OrthoFinder output from all 47 species
Smo163575	IXR1, CEV1,...	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.03	OrthoFinder output from all 47 species
Solyc03g097050.3.1	ATCSLD3, KJK,...	mannan synthase (CSLD)	0.02	OrthoFinder output from all 47 species
Solyc08g005280.2.1	ATCSLD3, KJK,...	mannan synthase (CSLD)	0.06	OrthoFinder output from all 47 species
Spa_g05758	AtCESA1, RSW1, CESA1	catalytic component *(CesA) of cellulose synthase...	0.05	OrthoFinder output from all 47 species
Spa_g26209	ATH-A, CESA2, ATCESA2	catalytic component *(CesA) of cellulose synthase...	0.04	OrthoFinder output from all 47 species
Spa_g26497	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.05	OrthoFinder output from all 47 species
Spa_g26805	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Spa_g39807	ATH-A, CESA2, ATCESA2	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Spa_g40617	ATCSLD2, CSLD2	mannan synthase *(CSLD) & original description: none	0.04	OrthoFinder output from all 47 species
Tin_g13995	ATH-A, CESA2, ATCESA2	catalytic component *(CesA) of cellulose synthase...	0.04	OrthoFinder output from all 47 species
Zm00001e002486_P001	ATCSLD3, KJK,...	mannan synthase (CSLD)	0.03	OrthoFinder output from all 47 species
Zm00001e004630_P001	CESA4, NWS2,...	catalytic component CesA of cellulose synthase complex	0.03	OrthoFinder output from all 47 species
Zm00001e009406_P001	IXR1, CEV1,...	catalytic component CesA of cellulose synthase complex	0.05	OrthoFinder output from all 47 species
Zm00001e009592_P002	ATH-A, CESA2,...	catalytic component CesA of cellulose synthase complex	0.03	OrthoFinder output from all 47 species
Zm00001e009843_P002	MUR10, ATCESA7,...	catalytic component CesA of cellulose synthase complex	0.02	OrthoFinder output from all 47 species
Zm00001e019828_P001	CESA8, LEW2,...	catalytic component CesA of cellulose synthase complex	0.03	OrthoFinder output from all 47 species
Zm00001e026711_P001	AtCESA1, RSW1,...	catalytic component CesA of cellulose synthase complex	0.04	OrthoFinder output from all 47 species
Zm00001e031187_P001	AtCESA1, RSW1,...	catalytic component CesA of cellulose synthase complex	0.03	OrthoFinder output from all 47 species
Zm00001e033093_P003	IXR1, CEV1,...	catalytic component CesA of cellulose synthase complex	0.02	OrthoFinder output from all 47 species
Zm00001e033375_P001	ATH-A, CESA2,...	catalytic component CesA of cellulose synthase complex	0.02	OrthoFinder output from all 47 species
Zm00001e034187_P001	MUR10, ATCESA7,...	catalytic component CesA of cellulose synthase complex	0.03	OrthoFinder output from all 47 species
Zm00001e035205_P002	ATCSLD2, CSLD2,...	D-glucan synthase (CSLF)	0.03	OrthoFinder output from all 47 species
Zm00001e039669_P001	ATCSLD5, CSLD5,...	mannan synthase (CSLD)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000271	polysaccharide biosynthetic process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0006073	cellular glucan metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008194	UDP-glycosyltransferase activity	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009250	glucan biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	glycosyltransferase activity	None	Extended
MF	GO:0016758	hexosyltransferase activity	None	Extended
MF	GO:0016759	cellulose synthase activity	None	Extended
MF	GO:0016760	cellulose synthase (UDP-forming) activity	IEA	Interproscan
BP	GO:0030243	cellulose metabolic process	None	Extended
BP	GO:0030244	cellulose biosynthetic process	IEA	Interproscan
BP	GO:0033692	cellular polysaccharide biosynthetic process	None	Extended
BP	GO:0034637	cellular carbohydrate biosynthetic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
MF	GO:0035251	UDP-glucosyltransferase activity	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
MF	GO:0046527	glucosyltransferase activity	None	Extended
BP	GO:0051273	beta-glucan metabolic process	None	Extended
BP	GO:0051274	beta-glucan biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004427	inorganic diphosphate phosphatase activity	IEP	HCCA
BP	GO:0006811	monoatomic ion transport	IEP	HCCA
BP	GO:0006812	monoatomic cation transport	IEP	HCCA
MF	GO:0008168	methyltransferase activity	IEP	HCCA
MF	GO:0008171	O-methyltransferase activity	IEP	HCCA
MF	GO:0008324	monoatomic cation transmembrane transporter activity	IEP	HCCA
MF	GO:0009678	pyrophosphate hydrolysis-driven proton transmembrane transporter activity	IEP	HCCA
MF	GO:0015075	monoatomic ion transmembrane transporter activity	IEP	HCCA
MF	GO:0015078	proton transmembrane transporter activity	IEP	HCCA
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	IEP	HCCA
MF	GO:0015399	primary active transmembrane transporter activity	IEP	HCCA
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	HCCA
MF	GO:0022804	active transmembrane transporter activity	IEP	HCCA
MF	GO:0022853	active monoatomic ion transmembrane transporter activity	IEP	HCCA
MF	GO:0022890	inorganic cation transmembrane transporter activity	IEP	HCCA
MF	GO:0030246	carbohydrate binding	IEP	HCCA
MF	GO:0030247	polysaccharide binding	IEP	HCCA
BP	GO:0034220	monoatomic ion transmembrane transport	IEP	HCCA
BP	GO:0098655	monoatomic cation transmembrane transport	IEP	HCCA
BP	GO:0098660	inorganic ion transmembrane transport	IEP	HCCA
BP	GO:0098662	inorganic cation transmembrane transport	IEP	HCCA
BP	GO:1902600	proton transmembrane transport	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR005150	Cellulose_synth	340	1062
IPR027934	CES_Znf_RING	9	78

External Links

No external refs found!

Nbi_g21980 (IXR1, CEV1, CESA3,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation