Nbi_g22008

Description : not classified & original description: none

Gene families : OG0009011 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009011_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Nbi_g22008
Cluster	HCCA: Cluster_62

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00001p00272590	evm_27.TU.AmTr_v1...	Ribosomal protein S3, mitochondrial OS=Petunia hybrida	0.03	OrthoFinder output from all 47 species
ATMG00090	No alias	structural constituent of ribosome;protein binding	0.12	OrthoFinder output from all 47 species
Aev_g20617	No alias	not classified & original description: none	0.22	OrthoFinder output from all 47 species
Ala_g25281	No alias	not classified & original description: none	0.18	OrthoFinder output from all 47 species
Als_g05492	No alias	not classified & original description: none	0.28	OrthoFinder output from all 47 species
Aob_g23054	No alias	not classified & original description: none	0.13	OrthoFinder output from all 47 species
Aob_g29749	No alias	not classified & original description: none	0.16	OrthoFinder output from all 47 species
Aop_g18051	No alias	not classified & original description: none	0.18	OrthoFinder output from all 47 species
Cba_g33316	No alias	not classified & original description: none	0.26	OrthoFinder output from all 47 species
Ceric.23G029400.1	Ceric.23G029400	not classified & original description: pacid=50610062...	0.22	OrthoFinder output from all 47 species
Cre11.g467702	No alias	No description available	0.03	OrthoFinder output from all 47 species
Dde_g51885	No alias	not classified & original description: none	0.12	OrthoFinder output from all 47 species
Gb_13807	No alias	Ribosomal protein S3, mitochondrial OS=Zea mays...	0.1	OrthoFinder output from all 47 species
LOC_Os12g34054.1	LOC_Os12g34054	component mtRPS3 of small ribosomal subunit proteome	0.09	OrthoFinder output from all 47 species
LOC_Os12g34124.1	LOC_Os12g34124	component mtRPS3 of small ribosomal subunit proteome	0.09	OrthoFinder output from all 47 species
Len_g01174	No alias	not classified & original description: none	0.1	OrthoFinder output from all 47 species
Lfl_g38544	No alias	not classified & original description: none	0.07	OrthoFinder output from all 47 species
Mp1g05170.1	No alias	no hits & (original description: none)	0.05	OrthoFinder output from all 47 species
Pir_g61975	No alias	not classified & original description: none	0.21	OrthoFinder output from all 47 species
Sam_g08984	No alias	not classified & original description: none	0.1	OrthoFinder output from all 47 species
Solyc05g045826.1.1	Solyc05g045826	Ribosomal protein S3, mitochondrial OS=Petunia hybrida...	0.02	OrthoFinder output from all 47 species
Spa_g02218	No alias	not classified & original description: none	0.12	OrthoFinder output from all 47 species
Tin_g11330	No alias	not classified & original description: none	0.19	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003954	NADH dehydrogenase activity	IEP	HCCA
MF	GO:0003955	NAD(P)H dehydrogenase (quinone) activity	IEP	HCCA
MF	GO:0004129	cytochrome-c oxidase activity	IEP	HCCA
MF	GO:0005215	transporter activity	IEP	HCCA
CC	GO:0005840	ribosome	IEP	HCCA
BP	GO:0006091	generation of precursor metabolites and energy	IEP	HCCA
MF	GO:0008137	NADH dehydrogenase (ubiquinone) activity	IEP	HCCA
MF	GO:0009055	electron transfer activity	IEP	HCCA
BP	GO:0009060	aerobic respiration	IEP	HCCA
BP	GO:0009141	nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009144	purine nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009199	ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	IEP	HCCA
MF	GO:0015078	proton transmembrane transporter activity	IEP	HCCA
MF	GO:0015399	primary active transmembrane transporter activity	IEP	HCCA
MF	GO:0015453	oxidoreduction-driven active transmembrane transporter activity	IEP	HCCA
BP	GO:0015980	energy derivation by oxidation of organic compounds	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
MF	GO:0016651	oxidoreductase activity, acting on NAD(P)H	IEP	HCCA
MF	GO:0016655	oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	IEP	HCCA
MF	GO:0016675	oxidoreductase activity, acting on a heme group of donors	IEP	HCCA
MF	GO:0022804	active transmembrane transporter activity	IEP	HCCA
MF	GO:0022853	active monoatomic ion transmembrane transporter activity	IEP	HCCA
MF	GO:0022857	transmembrane transporter activity	IEP	HCCA
BP	GO:0022900	electron transport chain	IEP	HCCA
BP	GO:0022904	respiratory electron transport chain	IEP	HCCA
BP	GO:0034220	monoatomic ion transmembrane transport	IEP	HCCA
BP	GO:0042773	ATP synthesis coupled electron transport	IEP	HCCA
CC	GO:0043228	non-membrane-bounded organelle	IEP	HCCA
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	HCCA
BP	GO:0045333	cellular respiration	IEP	HCCA
BP	GO:0046034	ATP metabolic process	IEP	HCCA
MF	GO:0048038	quinone binding	IEP	HCCA
MF	GO:0050136	NADH dehydrogenase (quinone) activity	IEP	HCCA
MF	GO:0051287	NAD binding	IEP	HCCA
BP	GO:0098655	monoatomic cation transmembrane transport	IEP	HCCA
BP	GO:0098660	inorganic ion transmembrane transport	IEP	HCCA
BP	GO:0098662	inorganic cation transmembrane transport	IEP	HCCA
CC	GO:0110165	cellular anatomical entity	IEP	HCCA
BP	GO:1902600	proton transmembrane transport	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001351	Ribosomal_S3_C	337	417

External Links

No external refs found!

Nbi_g22008

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation