Aliases : TMO6
Description : transcription factor *(DOF) & original description: none
Gene families : OG0000067 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000067_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G47655 | No alias | Dof-type zinc finger DNA-binding family protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g012791 | CDF3 | transcription factor *(DOF) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g012792 | CDF3 | transcription factor *(DOF) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g20056 | CDF3 | transcription factor *(DOF) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g22545 | CDF3 | transcription factor *(DOF) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g47633 | CDF3 | transcription factor *(DOF) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g18797 | OBP3 | transcription factor *(DOF) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene34893.t1 | OBP4, Aspi01Gene34893 | transcription factor *(DOF) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g26303 | TMO6 | transcription factor *(DOF) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g72531 | CDF2 | transcription factor *(DOF) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g05583 | CDF3 | transcription factor *(DOF) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g20658 | TMO6 | transcription factor *(DOF) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g10735 | OBP3 | transcription factor *(DOF) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g14293 | No alias | transcription factor *(DOF) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g16493 | CDF3 | transcription factor *(DOF) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc05g054510.2.1 | OBP3, Solyc05g054510 | transcription factor (DOF) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc11g010940.2.1 | Solyc11g010940 | transcription factor (DOF) | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g23610 | TMO6 | transcription factor *(DOF) & original description: none | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEA | Interproscan |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
| BP | GO:0006082 | organic acid metabolic process | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
| BP | GO:0006520 | amino acid metabolic process | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| MF | GO:0016651 | oxidoreductase activity, acting on NAD(P)H | IEP | HCCA |
| MF | GO:0016655 | oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | IEP | HCCA |
| MF | GO:0016874 | ligase activity | IEP | HCCA |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| BP | GO:0043038 | amino acid activation | IEP | HCCA |
| BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0043436 | oxoacid metabolic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044281 | small molecule metabolic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR003851 | Znf_Dof | 67 | 122 |
| No external refs found! |
