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  5. Nbi_g22621

Nbi_g22621


Description : not classified & original description: none


Gene families : OG0000103 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000103_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g22621

Target Alias Description ECC score Gene Family Method Actions
Ala_g08369 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g08699 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g18366 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g18367 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g25891 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g32496 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g24932 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g47832 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g22493 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g39500 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g07820 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g38106 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g48667 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g52050 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g47736 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g54021 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g58669 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g54915 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s1786.g028162 No alias not classified & original description: CDS=1-1269 0.03 OrthoFinder output from all 47 species
Sam_g28205 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g13796 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g20327 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0007165 signal transduction IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0015074 DNA integration IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002182 NB-ARC 207 493
IPR000157 TIR_dom 18 118
No external refs found!