Nbi_g22892


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g22892

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00080380 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g59720,... 0.03 OrthoFinder output from all 47 species
Adi_g004418 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g101185 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g17771 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g12481 OTP82 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g16619 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g35854 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06335 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18055 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g19949 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g58851 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g62404 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g04156 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g07571 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g17248 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g23990 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene64480.t1 Aspi01Gene64480 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0005.g008952 No alias not classified & original description: CDS=1-2550 0.05 OrthoFinder output from all 47 species
Cba_g75350 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.06G074600.1 Ceric.06G074600 not classified & original description: pacid=50619733... 0.05 OrthoFinder output from all 47 species
Dac_g05194 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g22336 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g30041 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g05737 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g06332 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g21154 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g21351 CRR22 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dcu_g21492 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g35954 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g43239 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g43241 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g07340 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g21984 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g23187 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23605 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26387 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26395 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g36368 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g50888 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os03g43420.1 OSB1, LOC_Os03g43420 ssDNA-binding protein (OSB) 0.02 OrthoFinder output from all 47 species
Len_g03683 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g20435 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g29153 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g36336 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g37283 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g46769 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07093 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07787 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_82569g0020 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.06 OrthoFinder output from all 47 species
Msp_g04529 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g28092 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g04976 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g16442 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g38647 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g25436 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g26038 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g37511 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g43621 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g02310 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04638 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000561 No alias not classified & original description: CDS=191-3046 0.03 OrthoFinder output from all 47 species
Sam_g13567 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g33428 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g49086 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo34484 No alias Pentatricopeptide repeat-containing protein At3g46790,... 0.04 OrthoFinder output from all 47 species
Spa_g32763 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g06389 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g17315 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g22636 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e012422_P001 OSB1, Zm00001e012422 ssDNA-binding protein (OSB) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 346 369
IPR002885 Pentatricopeptide_repeat 581 606
IPR002885 Pentatricopeptide_repeat 473 520
IPR002885 Pentatricopeptide_repeat 270 317
IPR002885 Pentatricopeptide_repeat 371 419
IPR002885 Pentatricopeptide_repeat 169 217
No external refs found!