1. Home
  2. Species
  3. Nephrolepis biserrata
  4. Sequence
  5. Nbi_g22946

Nbi_g22946


Description : not classified & original description: none


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g22946
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00099p00122430 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 OrthoFinder output from all 47 species
Adi_g053440 ATERF4, RAP2.5,... subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Als_g27070 RAP2.12 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Als_g36562 ATERF8, ATERF-8, ERF8 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Als_g51788 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g26411 RAP2.1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05425.t1 ORA47, Aspi01Gene05425 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene05675.t1 Aspi01Gene05675 subgroup ERF-III transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene24390.t1 RAP2.1, Aspi01Gene24390 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene24392.t1 RAP2.1, Aspi01Gene24392 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene47265.t1 TINY2, Aspi01Gene47265 subgroup ERF-III transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene49926.t1 ATERF12, ERF12,... subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene53875.t1 DEAR4, RAP2.10,... not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0096.g043715 No alias subgroup ERF-IV/DREB2 transcription factor & original... 0.05 OrthoFinder output from all 47 species
Cba_g28947 RAP2.11 transcription factor *(ERN1) & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g44548 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.13G021800.1 ERF-1, ATERF-1,... subgroup ERF-IX transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ehy_g10951 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Ehy_g22214 tny subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g27094 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g16168 TINY2 subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Len_g55869 RAP2.11 transcription factor *(ERN1) & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g26716 ORA47 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g34326 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_198113g0010 ERF-1, ATERF-1 Ethylene-responsive transcription factor 1A... 0.03 OrthoFinder output from all 47 species
Mp6g04880.1 DREB26 Ethylene-responsive transcription factor ERF008... 0.02 OrthoFinder output from all 47 species
Nbi_g09626 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ore_g44895 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g42920 RAP2.11 transcription factor *(ERN1) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g33101 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Zm00001e016064_P001 RAP2.2, Zm00001e016064 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
InterPro domains Description Start Stop
IPR025927 Potential_DNA-bd 311 376
IPR001471 AP2/ERF_dom 577 622
IPR003340 B3_DNA-bd 47 118
No external refs found!