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  5. Nbi_g23768

Nbi_g23768


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g23768
Cluster HCCA: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
Aev_g33525 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g42294 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g48795 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g05226 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26666 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g26861 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0028.g023921 No alias not classified & original description: CDS=1-2157 0.02 OrthoFinder output from all 47 species
Cba_g21792 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g72718 MEF21 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.13G010300.1 Ceric.13G010300 not classified & original description: pacid=50636329... 0.03 OrthoFinder output from all 47 species
Ceric.30G023200.1 Ceric.30G023200 not classified & original description: pacid=50609019... 0.03 OrthoFinder output from all 47 species
Dac_g24393 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g50444 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g17972 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04754 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07379 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g40188 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g04357 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g06342 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g22363 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g28772 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g35725 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g41131 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g18773 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g25474 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g32016 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g39331 OTP85 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g13275 OTP82 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g14351 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g38356 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g39910 DOT4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g03298 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63187 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06965 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g54901 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g07455 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g13631 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g21946 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g27930 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo105197 CRR22 Pentatricopeptide repeat-containing protein At3g49710... 0.03 OrthoFinder output from all 47 species
Smo75659 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Tin_g06477 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g23281 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g27584 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g31227 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 564 588
IPR002885 Pentatricopeptide_repeat 666 688
IPR002885 Pentatricopeptide_repeat 283 330
IPR002885 Pentatricopeptide_repeat 590 636
IPR002885 Pentatricopeptide_repeat 181 229
IPR002885 Pentatricopeptide_repeat 385 432
IPR002885 Pentatricopeptide_repeat 792 840
IPR002885 Pentatricopeptide_repeat 692 738
IPR002885 Pentatricopeptide_repeat 487 534
No external refs found!