Aliases : VAC1, ECB2, ATECB2
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00003p00263110 | No alias | Pentatricopeptide repeat-containing protein At1g03540... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00063p00172440 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s02193p00008230 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At3g02330,... | 0.02 | OrthoFinder output from all 47 species | |
| AT1G18485 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT3G22150 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT3G63370 | OTP86 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT5G44785 | OSB3 | organellar single-stranded DNA binding protein 3 | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g025081 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g034232 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g060857 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g067822 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g42385 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g16829 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g24622 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g30051 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g04222 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g14332 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aob_g19060 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g08018 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g67887 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene71957.t1 | EMB2261, Aspi01Gene71957 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g24173 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g35158 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g38987 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.1Z079200.1 | CRR22, Ceric.1Z079200 | not classified & original description: pacid=50582193... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g42648 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g42748 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g07141 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g07608 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g16645 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g16673 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g17102 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g17290 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g38638 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g40120 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g25445 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g26464 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01021756001 | No alias | Pentatricopeptide repeat-containing protein At4g21300... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g05370 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g37521 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g36262 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g42313 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g17546 | OTP84 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g30877 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g20514 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g30359 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0022.g008680 | No alias | not classified & original description: CDS=1-2187 | 0.05 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0035.g011483 | No alias | not classified & original description: CDS=1-2124 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0037.g011851 | OTP84 | not classified & original description: CDS=1-2175 | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0057.g014697 | OTP86 | not classified & original description: CDS=1-2199 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0108.g020410 | No alias | not classified & original description: CDS=1-2748 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0117.g021127 | No alias | not classified & original description: CDS=28-1563 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0137.g022493 | No alias | not classified & original description: CDS=1-2544 | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g13666 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g18597 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g081020.1.1 | Solyc01g081020 | RNA editing factor (OTP80) | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g23932 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g32763 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g10359 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 515 | 563 |
| IPR002885 | Pentatricopeptide_repeat | 210 | 256 |
| IPR002885 | Pentatricopeptide_repeat | 414 | 460 |
| IPR002885 | Pentatricopeptide_repeat | 107 | 154 |
| IPR002885 | Pentatricopeptide_repeat | 312 | 358 |
| IPR002885 | Pentatricopeptide_repeat | 388 | 412 |
| IPR002885 | Pentatricopeptide_repeat | 184 | 208 |
| IPR002885 | Pentatricopeptide_repeat | 286 | 309 |
| IPR032867 | DYW_dom | 728 | 818 |
| No external refs found! |
