Nbi_g24066


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g24066

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00268120 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g29760,... 0.03 OrthoFinder output from all 47 species
AMTR_s00041p00129840 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g32430,... 0.03 OrthoFinder output from all 47 species
Adi_g005224 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g036697 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g33525 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g48795 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g03970 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g04237 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g07993 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g14569 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g16829 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g21955 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g24222 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g24393 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g28308 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g30600 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g31152 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36976 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27600 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g28195 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28681 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g36880 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g37340 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g37595 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g02659 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g02808 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g03408 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16640 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16780 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g17427 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g25195 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g68030 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g70728 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene08082.t1 EMB2261, Aspi01Gene08082 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene28610.t1 REME1, Aspi01Gene28610 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene28610.t2 REME1, Aspi01Gene28610 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene31490.t1 Aspi01Gene31490 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34544.t1 Aspi01Gene34544 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene41379.t1 Aspi01Gene41379 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene72317.t1 Aspi01Gene72317 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0117.g046569 No alias not classified & original description: CDS=1-2520 0.04 OrthoFinder output from all 47 species
Azfi_s0251.g060294 No alias not classified & original description: CDS=1-879 0.04 OrthoFinder output from all 47 species
Cba_g02701 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g03367 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g04727 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g25572 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g26795 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g29697 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34428 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g34865 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67474 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67652 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g77255 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.04G059000.1 Ceric.04G059000 not classified & original description: pacid=50632212... 0.03 OrthoFinder output from all 47 species
Ceric.15G008800.1 Ceric.15G008800 not classified & original description: pacid=50639552... 0.03 OrthoFinder output from all 47 species
Ceric.15G021100.1 Ceric.15G021100 not classified & original description: pacid=50639951... 0.05 OrthoFinder output from all 47 species
Ceric.15G056400.1 Ceric.15G056400 not classified & original description: pacid=50639467... 0.03 OrthoFinder output from all 47 species
Ceric.21G004000.1 Ceric.21G004000 not classified & original description: pacid=50604228... 0.04 OrthoFinder output from all 47 species
Ceric.24G028500.1 Ceric.24G028500 not classified & original description: pacid=50629587... 0.03 OrthoFinder output from all 47 species
Ceric.26G011100.1 Ceric.26G011100 not classified & original description: pacid=50599840... 0.05 OrthoFinder output from all 47 species
Ceric.28G001700.1 Ceric.28G001700 not classified & original description: pacid=50570577... 0.04 OrthoFinder output from all 47 species
Dac_g08335 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g14700 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g24393 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g35075 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g07141 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07738 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g11174 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g36401 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g49904 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g21285 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23535 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23944 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g18152 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g04791 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g17972 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Len_g32688 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g36336 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g37832 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g57360 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07850 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g14903 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g23637 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g26299 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g32670 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g20689 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28692 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g28772 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g32055 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g07147 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g24068 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g24651 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g24894 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g25474 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g27737 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g37318 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g38538 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g43377 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g05130 OTP82 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g10306 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g10959 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g13275 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g14351 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g15736 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g17400 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g23525 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g26310 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g33886 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g33905 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g37891 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g38356 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g40890 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57716 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g57982 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g22375 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05329 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g08859 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g11526 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29479 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29583 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g52857 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g53018 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53207 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53554 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g55132 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g56584 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g57818 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59344 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g63607 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g07175 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g21106 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g29565 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g55549 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g11538 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g12193 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g14912 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17860 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g18426 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g20978 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g22636 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g22902 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g23001 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g27976 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g31642 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g35267 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g41605 OTP81 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g43984 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g46234 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e007597_P001 Zm00001e007597 Pentatricopeptide repeat-containing protein At3g09040,... 0.04 OrthoFinder output from all 47 species
Zm00001e041694_P001 Zm00001e041694 Pentatricopeptide repeat-containing protein At5g16860... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0010181 FMN binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 72 118
IPR002885 Pentatricopeptide_repeat 174 220
IPR002885 Pentatricopeptide_repeat 480 526
IPR002885 Pentatricopeptide_repeat 276 323
IPR002885 Pentatricopeptide_repeat 378 424
IPR002885 Pentatricopeptide_repeat 250 275
IPR002885 Pentatricopeptide_repeat 556 582
IPR002885 Pentatricopeptide_repeat 352 369
IPR002885 Pentatricopeptide_repeat 455 476
No external refs found!