Nbi_g24069


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g24069

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00220350 OTP85,... Pentatricopeptide repeat-containing protein At2g02980,... 0.02 OrthoFinder output from all 47 species
AT3G24000 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g002881 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g003135 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g021050 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g036683 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g049071 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g066672 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g081561 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g109057 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g112114 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g117068 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g07462 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g12452 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g14520 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g25601 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g33318 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g36508 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06136 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07162 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g15782 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g21347 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26204 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30821 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g27127 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0001.g000557 OTP86 not classified & original description: CDS=1-2739 0.03 OrthoFinder output from all 47 species
Azfi_s0005.g009022 No alias not classified & original description: CDS=1-2334 0.03 OrthoFinder output from all 47 species
Azfi_s0020.g015372 OTP86 not classified & original description: CDS=1-2592 0.04 OrthoFinder output from all 47 species
Azfi_s0035.g025464 No alias not classified & original description: CDS=1-2154 0.03 OrthoFinder output from all 47 species
Azfi_s0048.g030454 No alias not classified & original description: CDS=2-2074 0.04 OrthoFinder output from all 47 species
Azfi_s0058.g034473 No alias not classified & original description: CDS=1-2799 0.04 OrthoFinder output from all 47 species
Azfi_s0062.g035255 No alias not classified & original description: CDS=1-1599 0.03 OrthoFinder output from all 47 species
Azfi_s0405.g068373 No alias not classified & original description: CDS=1-2967 0.04 OrthoFinder output from all 47 species
Azfi_s0873.g090702 No alias not classified & original description: CDS=1-2778 0.03 OrthoFinder output from all 47 species
Cba_g06933 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19473 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29632 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.04G100100.1 Ceric.04G100100 not classified & original description: pacid=50630537... 0.03 OrthoFinder output from all 47 species
Ceric.21G051400.1 VAC1, ECB2,... not classified & original description: pacid=50603510... 0.03 OrthoFinder output from all 47 species
Ceric.28G068300.1 DOT4, Ceric.28G068300 not classified & original description: pacid=50570176... 0.04 OrthoFinder output from all 47 species
Dac_g18582 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g35889 EMB2744 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g43504 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g32689 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g37149 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g12890 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g15910 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g18823 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g22169 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g28512 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g51019 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g51368 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g05451 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g09658 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g10412 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18472 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18577 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g26486 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g26588 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g41102 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07668 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g41072 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g14104 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28331 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28534 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g45693 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g04948 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06762 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07857 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g14898 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g30381 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g44630 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g08941 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g11385 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12550 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g42136 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57079 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57161 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57539 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g65274 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g15731 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g22081 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29785 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31859 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g43104 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g46005 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g56225 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g59303 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g02448 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g13748 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g16320 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g19460 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g19760 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g26655 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g27517 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g27568 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g29725 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g38969 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g08133 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g18079 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g44841 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g49369 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g55591 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g04677 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g04725 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05207 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g31074 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 486 508
IPR002885 Pentatricopeptide_repeat 181 202
IPR002885 Pentatricopeptide_repeat 106 132
IPR002885 Pentatricopeptide_repeat 715 763
IPR002885 Pentatricopeptide_repeat 817 865
IPR002885 Pentatricopeptide_repeat 308 355
IPR002885 Pentatricopeptide_repeat 207 253
IPR002885 Pentatricopeptide_repeat 511 558
IPR002885 Pentatricopeptide_repeat 614 660
IPR002885 Pentatricopeptide_repeat 409 456
No external refs found!