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Nbi_g24400 (CCL)


Aliases : CCL

Description : regulatory protein *(LIR1) of ferredoxin-NADP oxidoreductase activity & original description: none


Gene families : OG0007865 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007865_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g24400

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g01340.1 CCL, LOC_Os01g01340 LIR1 protein involved in ferredoxin-NADP oxidoreductase... 0.03 OrthoFinder output from all 47 species
Pnu_g17541 CCL regulatory protein *(LIR1) of ferredoxin-NADP... 0.03 OrthoFinder output from all 47 species
Spa_g03469 CCL regulatory protein *(LIR1) of ferredoxin-NADP... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0009507 chloroplast IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR009856 Lir1 58 185
No external refs found!