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  5. Nbi_g24704

Nbi_g24704


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g24704

Target Alias Description ECC score Gene Family Method Actions
AT2G13600 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G23330 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G20010 PTAC9, OSB2 plastid transcriptionally active 9 0.05 OrthoFinder output from all 47 species
AT5G37570 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g066534 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g100883 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g07157 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g24191 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g43288 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g03700 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Ala_g17640 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g36433 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g03860 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g04417 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g19004 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g26559 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g09402 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Aspi01Gene13090.t2 Aspi01Gene13090 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene28168.t1 Aspi01Gene28168 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0005.g009385 No alias not classified & original description: CDS=1-2319 0.07 OrthoFinder output from all 47 species
Azfi_s0032.g024983 No alias not classified & original description: CDS=1-3423 0.05 OrthoFinder output from all 47 species
Azfi_s0069.g036580 No alias not classified & original description: CDS=1-1665 0.05 OrthoFinder output from all 47 species
Ceric.03G008600.1 Ceric.03G008600 not classified & original description: pacid=50571724... 0.06 OrthoFinder output from all 47 species
Ceric.09G069300.1 OTP86, Ceric.09G069300 not classified & original description: pacid=50588354... 0.05 OrthoFinder output from all 47 species
Ceric.20G021300.1 Ceric.20G021300 not classified & original description: pacid=50566784... 0.06 OrthoFinder output from all 47 species
Ceric.30G027600.1 Ceric.30G027600 not classified & original description: pacid=50609466... 0.03 OrthoFinder output from all 47 species
Dac_g18413 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g38619 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g05782 CRR22 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dde_g04001 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g46467 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Gb_23320 CRR22 RNA editing factor (OTP82) 0.04 OrthoFinder output from all 47 species
LOC_Os01g40720.1 LOC_Os01g40720 RNA editing factor (MEF7) 0.03 OrthoFinder output from all 47 species
LOC_Os03g32620.1 LOC_Os03g32620 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
LOC_Os04g33840.1 LOC_Os04g33840 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
LOC_Os06g27790.1 REME1, LOC_Os06g27790 Pentatricopeptide repeat-containing protein At2g03880,... 0.04 OrthoFinder output from all 47 species
LOC_Os07g10400.1 CRR22, LOC_Os07g10400 Pentatricopeptide repeat-containing protein At1g11290,... 0.06 OrthoFinder output from all 47 species
LOC_Os08g05750.1 LOC_Os08g05750 Pentatricopeptide repeat-containing protein At4g16835,... 0.03 OrthoFinder output from all 47 species
LOC_Os08g38610.1 LOC_Os08g38610 Pentatricopeptide repeat-containing protein At1g26900,... 0.03 OrthoFinder output from all 47 species
Len_g04841 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g05447 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18246 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g18979 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g54670 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g54960 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Len_g56529 OTP84 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
MA_114565g0020 OTP84 Pentatricopeptide repeat-containing protein At5g16860... 0.03 OrthoFinder output from all 47 species
MA_7379g0020 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
MA_75133g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
MA_95507g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
Msp_g03493 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g22768 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g25636 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g46020 MEF22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g10208 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g41721 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ore_g17591 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63815 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g05340 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g06858 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07430 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29582 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g32279 MEF21 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g32530 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g41679 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g43237 VAC1, ECB2, ATECB2 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g59188 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g59315 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0087.g018498 No alias not classified & original description: CDS=87-2291 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0132.g022166 No alias not classified & original description: CDS=1-2514 0.08 OrthoFinder output from all 47 species
Tin_g05225 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g05541 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g17800 EMB2261 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g21929 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g26871 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 460 482
IPR002885 Pentatricopeptide_repeat 159 186
IPR002885 Pentatricopeptide_repeat 187 214
IPR002885 Pentatricopeptide_repeat 588 636
IPR002885 Pentatricopeptide_repeat 690 737
IPR002885 Pentatricopeptide_repeat 385 433
IPR002885 Pentatricopeptide_repeat 286 331
IPR002885 Pentatricopeptide_repeat 487 534
No external refs found!