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  5. Nbi_g25470

Nbi_g25470


Description : subfamily ABCG transporter & original description: none


Gene families : OG0000438 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000438_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g25470

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00258490 ABCG14,... Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Ala_g02542 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Als_g16669 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Als_g27548 No alias subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Als_g50767 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g07219 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene01671.t1 Aspi01Gene01671 subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene10922.t1 Aspi01Gene10922 subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene22309.t1 Aspi01Gene22309 subfamily ABCG transporter & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene36520.t1 Aspi01Gene36520 subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0073.g037209 No alias subfamily ABCG transporter & original description: CDS=211-2310 0.03 OrthoFinder output from all 47 species
Cba_g17387 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g35182 No alias subfamily ABCG transporter & original description: none 0.07 OrthoFinder output from all 47 species
Ceric.13G008600.1 Ceric.13G008600 subfamily ABCG transporter & original description:... 0.01 OrthoFinder output from all 47 species
Ceric.30G014400.1 Ceric.30G014400 subfamily ABCG transporter & original description:... 0.06 OrthoFinder output from all 47 species
Dac_g16939 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g12680 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g22600 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01014402001 No alias Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Gb_26434 ABCG14 cytokinin transporter (ABCG14). subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Gb_38402 ABCG14 subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
LOC_Os08g07010.1 ABCG14, LOC_Os08g07010 subfamily ABCG transporter 0.01 OrthoFinder output from all 47 species
MA_427512g0010 ABCG14 ABC transporter G family member 27 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_4863g0010 ABCG26, WBC27 sporopollenin precursor exporter. subfamily ABCG transporter 0.01 OrthoFinder output from all 47 species
MA_81274g0010 ABCG14 subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Mp6g05900.1 ABCG14 subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Msp_g14978 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g31647 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g35834 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0062.g015589 No alias not classified & original description: CDS=22-1557 0.04 OrthoFinder output from all 47 species
Solyc04g070970.4.1 Solyc04g070970 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Solyc08g005580.3.1 ABCG14, Solyc08g005580 cytokinin transporter (ABCG14). subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
Spa_g18374 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g26315 No alias subfamily ABCG transporter & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g09850 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e040163_P001 ABCG14, Zm00001e040163 cytokinin transporter (ABCG14). subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0004097 catechol oxidase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 540 749
IPR003439 ABC_transporter-like_ATP-bd 206 355
No external refs found!