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  5. Nbi_g25493

Nbi_g25493


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g25493
Cluster HCCA: Cluster_76

Target Alias Description ECC score Gene Family Method Actions
Adi_g004513 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g38690 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06403 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30822 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g54704 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g26992 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0004.g008858 No alias not classified & original description: CDS=1-2760 0.03 OrthoFinder output from all 47 species
Azfi_s3912.g117324 No alias not classified & original description: CDS=1-774 0.03 OrthoFinder output from all 47 species
Cba_g19300 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.39G022100.1 Ceric.39G022100 not classified & original description: pacid=50582510... 0.03 OrthoFinder output from all 47 species
Dde_g02930 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g15529 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g15862 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16405 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g28912 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07440 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07817 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g35930 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g04332 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g04495 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g28222 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g33835 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g34512 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g37650 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g40961 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g07086 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g15701 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g20260 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g21177 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g23760 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g30346 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g39331 OTP85 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g23513 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05658 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53175 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc06g064600.1.1 Solyc06g064600 Pentatricopeptide repeat-containing protein At1g56690,... 0.03 OrthoFinder output from all 47 species
Tin_g04171 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08446 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g12305 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 357 403
IPR002885 Pentatricopeptide_repeat 152 199
IPR002885 Pentatricopeptide_repeat 49 98
IPR002885 Pentatricopeptide_repeat 765 812
IPR002885 Pentatricopeptide_repeat 254 301
IPR002885 Pentatricopeptide_repeat 459 505
IPR002885 Pentatricopeptide_repeat 560 607
IPR002885 Pentatricopeptide_repeat 663 708
IPR002885 Pentatricopeptide_repeat 129 151
IPR002885 Pentatricopeptide_repeat 433 456
IPR002885 Pentatricopeptide_repeat 331 353
No external refs found!