Nbi_g25540 (PDLP6)


Aliases : PDLP6

Description : not classified & original description: none


Gene families : OG0000026 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g25540

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene44500.t1 PDLP7, Aspi01Gene44500 plasmodesmal protein *(PDLP) & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0028.g023974 No alias EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
GSVIVT01037982001 No alias Protein modification.phosphorylation.TKL kinase... 0.02 OrthoFinder output from all 47 species
Gb_08425 No alias protein kinase (LRR-VIII-2) 0.04 OrthoFinder output from all 47 species
Gb_34208 No alias Probable LRR receptor-like serine/threonine-protein... 0.03 OrthoFinder output from all 47 species
LOC_Os02g43000.1 PDLP8, LOC_Os02g43000 plasmodesmal protein (PDLP) 0.04 OrthoFinder output from all 47 species
Zm00001e030966_P001 PDLP6, Zm00001e030966 plasmodesmal protein (PDLP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002902 GNK2 179 272
IPR002902 GNK2 59 160
No external refs found!