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  5. Nbi_g26273

Nbi_g26273 (SPL8)


Aliases : SPL8

Description : SBP-type transcription factor & original description: none


Gene families : OG0000121 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000121_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g26273
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00106p00144050 SPL8,... RNA biosynthesis.transcriptional activation.SBP... 0.02 OrthoFinder output from all 47 species
AT1G27360 SPL11 squamosa promoter-like 11 0.03 OrthoFinder output from all 47 species
AT1G27370 SPL10 squamosa promoter binding protein-like 10 0.03 OrthoFinder output from all 47 species
Adi_g015319 SPL8 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g029308 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g27957 AtSPL9, SPL9 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06099 SPL8 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15269 SPL10 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g33190 SPL8 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g46708 SPL8 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g08296 SPL8 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g08472 No alias SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene67363.t1 SPL8, Aspi01Gene67363 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0147.g053031 SPL8 SBP-type transcription factor & original description: CDS=1-2847 0.03 OrthoFinder output from all 47 species
Cba_g09732 SPL3 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19012 SPL8 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g19872 SPL8 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g26158 SPL8 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g26615 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34343 AtSPL9, SPL9 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.07G099600.1 SPL13, SPL13A,... SBP-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.20G021600.1 SPL2, Ceric.20G021600 SBP-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.25G025600.1 SPL3, Ceric.25G025600 SBP-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Cre10.g433350 SPL4 RNA biosynthesis.transcriptional activation.SBP... 0.01 OrthoFinder output from all 47 species
Dac_g16262 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g03001 SPL8 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g48961 SPL8 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g08586 SPL8 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g23878 SPL8 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01008556001 SPL13, SPL13A RNA biosynthesis.transcriptional activation.SBP... 0.02 OrthoFinder output from all 47 species
GSVIVT01010496001 SPL2 RNA biosynthesis.transcriptional activation.SBP... 0.03 OrthoFinder output from all 47 species
GSVIVT01014302001 SPL4 RNA biosynthesis.transcriptional activation.SBP... 0.03 OrthoFinder output from all 47 species
GSVIVT01033519001 AtSPL9, SPL9 RNA biosynthesis.transcriptional activation.SBP... 0.04 OrthoFinder output from all 47 species
LOC_Os06g49010.4 SPL2, LOC_Os06g49010 transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
LOC_Os09g32944.1 SPL13, SPL13A,... transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Len_g21188 SPL8 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g20544 SPL8 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g23606 No alias SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g22224 SPL2 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g57228 SPL8 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0171.g024379 SPL8 SBP-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0194.g025410 No alias SBP-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Sam_g14898 No alias SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g30123 No alias SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g48834 No alias SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g077920.4.1 SPL3, Solyc02g077920 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Spa_g48285 SPL8 SBP-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g14278 SPL8 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e010067_P001 AtSPL9, SPL9,... transcription factor (SBP) 0.01 OrthoFinder output from all 47 species
Zm00001e010443_P001 SPL5, Zm00001e010443 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Zm00001e013198_P001 SPL2, Zm00001e013198 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Zm00001e041526_P001 SPL3, Zm00001e041526 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030976 thiamine pyrophosphate binding IEP HCCA
MF GO:0050997 quaternary ammonium group binding IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
InterPro domains Description Start Stop
IPR004333 SBP_dom 262 335
No external refs found!