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  5. Nbi_g26666

Nbi_g26666


Description : not classified & original description: none


Gene families : OG0000125 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000125_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g26666
Cluster HCCA: Cluster_138

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00254860 evm_27.TU.AmTr_v1... UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00023p00168910 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00033p00169500 evm_27.TU.AmTr_v1... Putative UPF0481 protein At3g02645 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00033p00171210 evm_27.TU.AmTr_v1... Putative UPF0481 protein At3g02645 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00278p00010750 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT1G65985 No alias Plant protein of unknown function (DUF247) 0.02 OrthoFinder output from all 47 species
AT1G67150 No alias Plant protein of unknown function (DUF247) 0.03 OrthoFinder output from all 47 species
AT3G47200 No alias Plant protein of unknown function (DUF247) 0.03 OrthoFinder output from all 47 species
AT3G47210 No alias Plant protein of unknown function (DUF247) 0.04 OrthoFinder output from all 47 species
AT3G50130 No alias Plant protein of unknown function (DUF247) 0.02 OrthoFinder output from all 47 species
AT3G50160 No alias Plant protein of unknown function (DUF247) 0.04 OrthoFinder output from all 47 species
AT3G50170 No alias Plant protein of unknown function (DUF247) 0.03 OrthoFinder output from all 47 species
AT5G22550 No alias Plant protein of unknown function (DUF247) 0.02 OrthoFinder output from all 47 species
Ala_g31450 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g21124 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g23411 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26134 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g30226 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g06594 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g30297 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene48412.t1 Aspi01Gene48412 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene53577.t1 Aspi01Gene53577 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.06G018800.1 Ceric.06G018800 not classified & original description: pacid=50620702... 0.05 OrthoFinder output from all 47 species
Ceric.08G042200.1 Ceric.08G042200 not classified & original description: pacid=50637605... 0.03 OrthoFinder output from all 47 species
Ceric.08G043000.1 Ceric.08G043000 not classified & original description: pacid=50637921... 0.02 OrthoFinder output from all 47 species
Ceric.08G043100.1 Ceric.08G043100 not classified & original description: pacid=50638846... 0.03 OrthoFinder output from all 47 species
Ceric.30G007100.1 Ceric.30G007100 not classified & original description: pacid=50608898... 0.11 OrthoFinder output from all 47 species
Dcu_g14683 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g46391 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01017510001 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01026858001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01035823001 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_37285 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_37287 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os01g21670.1 LOC_Os01g21670 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os01g38190.1 LOC_Os01g38190 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os04g42650.1 LOC_Os04g42650 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os08g30520.1 LOC_Os08g30520 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os08g42570.1 LOC_Os08g42570 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os12g29650.1 LOC_Os12g29650 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Len_g35601 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Lfl_g12279 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_26069g0010 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_413488g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_749769g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp7g16570.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g27647 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Ppi_g16843 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g30785 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g63876 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Solyc05g006690.3.1 Solyc05g006690 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc06g068340.3.1 Solyc06g068340 Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc07g007010.1.1 Solyc07g007010 Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc10g079520.1.1 Solyc10g079520 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc10g079530.2.1 Solyc10g079530 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc12g099300.1.1 Solyc12g099300 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Spa_g06895 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g24899 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g30858 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e036342_P001 Zm00001e036342 Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005199 structural constituent of cell wall IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0009664 plant-type cell wall organization IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0020037 heme binding IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
CC GO:0048046 apoplast IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071669 plant-type cell wall organization or biogenesis IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR004158 DUF247_pln 51 528
No external refs found!