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  5. Nbi_g27634

Nbi_g27634


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g27634

Target Alias Description ECC score Gene Family Method Actions
Ala_g18491 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g22597 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g38174 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g26992 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene40416.t1 CRR22, Aspi01Gene40416 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20235 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.03G027500.1 Ceric.03G027500 not classified & original description: pacid=50572299... 0.04 OrthoFinder output from all 47 species
Ceric.06G003600.1 Ceric.06G003600 not classified & original description: pacid=50620322... 0.05 OrthoFinder output from all 47 species
Ceric.09G009700.1 Ceric.09G009700 not classified & original description: pacid=50587563... 0.04 OrthoFinder output from all 47 species
Ceric.12G090300.1 Ceric.12G090300 not classified & original description: pacid=50600499... 0.04 OrthoFinder output from all 47 species
Ceric.18G069700.1 CRR2, Ceric.18G069700 not classified & original description: pacid=50622363... 0.03 OrthoFinder output from all 47 species
Ceric.21G053500.1 Ceric.21G053500 not classified & original description: pacid=50604142... 0.05 OrthoFinder output from all 47 species
Ceric.24G028500.1 Ceric.24G028500 not classified & original description: pacid=50629587... 0.04 OrthoFinder output from all 47 species
Ceric.25G036300.1 Ceric.25G036300 not classified & original description: pacid=50594016... 0.05 OrthoFinder output from all 47 species
Dac_g27646 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g27771 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g30474 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g30493 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g42988 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g15906 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g28079 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g41493 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g07052 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g29296 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07032 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07821 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07836 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g13001 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g23154 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g21177 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g39331 OTP85 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g03029 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g18964 EMB2758 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g35307 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g01657 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04645 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g05293 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g05926 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g06923 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g07585 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g13340 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g15635 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g52993 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53966 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g63206 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g07175 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g06042 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004637 phosphoribosylamine-glycine ligase activity IEP HCCA
BP GO:0006144 purine nucleobase metabolic process IEP HCCA
BP GO:0009112 nucleobase metabolic process IEP HCCA
BP GO:0009113 purine nucleobase biosynthetic process IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0046112 nucleobase biosynthetic process IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 622 668
IPR002885 Pentatricopeptide_repeat 417 464
IPR002885 Pentatricopeptide_repeat 519 566
IPR002885 Pentatricopeptide_repeat 724 770
IPR002885 Pentatricopeptide_repeat 315 362
IPR002885 Pentatricopeptide_repeat 214 260
IPR002885 Pentatricopeptide_repeat 113 160
IPR002885 Pentatricopeptide_repeat 801 822
No external refs found!