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  5. Nbi_g28108

Nbi_g28108 (UBQ11)


Aliases : UBQ11

Description : UBQ ubiquitin-fold protein & original description: none


Gene families : OG0000054 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g28108

Target Alias Description ECC score Gene Family Method Actions
Aev_g34396 UBQ12 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g48554 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g39498 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
MA_10431748g0010 No alias Ubiquitin-40S ribosomal protein S27a-1 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Msp_g43514 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g26442 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g44239 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g38541 UBQ14 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g64758 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g14196 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g26909 UBQ11 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g42666 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR000626 Ubiquitin-like_dom 79 150
IPR000626 Ubiquitin-like_dom 155 220
IPR000626 Ubiquitin-like_dom 3 74
No external refs found!