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  5. Nbi_g28129

Nbi_g28129


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g28129

Target Alias Description ECC score Gene Family Method Actions
Ala_g30051 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g07209 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g14332 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19255 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04175 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g15693 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g04687 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07225 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g06429 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g22911 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g41204 No alias ssDNA-binding protein *(OSB) & original description: none 0.07 OrthoFinder output from all 47 species
Pir_g56905 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06358 MEF19 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g22244 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g39273 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g53193 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g53727 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53968 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0087.g018498 No alias not classified & original description: CDS=87-2291 0.04 OrthoFinder output from all 47 species
Spa_g18079 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g09800 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 302 325
IPR002885 Pentatricopeptide_repeat 506 530
IPR002885 Pentatricopeptide_repeat 21 69
IPR002885 Pentatricopeptide_repeat 225 272
IPR002885 Pentatricopeptide_repeat 327 374
IPR002885 Pentatricopeptide_repeat 123 170
IPR002885 Pentatricopeptide_repeat 429 476
No external refs found!